Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033270G001
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Entry
GSTEN00033270G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K19656
intraflagellar transport protein 122
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00033270G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
GSTEN00033270G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
WD40_WDHD1_1st
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40
Zn_ribbon_IFT122
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
TPR_IF140-IFT172
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
CAG11335
UniProt:
Q4RJU7
LinkDB
All DBs
Position
9
AA seq
1210 aa
AA seq
DB search
VYDITFKPDGSQVVIAAGQRVLVYDTADGSVIQPLSGHSAIVYCVDYAKDGKQFASGSAD
KSVIIWTSKLQGILRYTHNDSIQSLAYNPVTQQLASCTCSDFGLWSPDQKSVSKHKVSSR
ITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGASPIWSIAWNPSKDEHNDILA
VTDWGQKLSFYQLSGKQIGKDKFLTFDPCCISYFPKGEYIVLAGSDKQASLYTKDGVRLG
TIGEQNSWVWTCHVKPDSNFVVLGCQDGTIACYQIVFSTVHSLYKDRYAYRDNMTDVIVQ
HLITEQKVRIKCRELVKKIAIYRNRLAIQLPVKIVIYELTSNDASDMHYSIKEKICKKFE
CNLLVVCSQNIILCQEKRLQCLSFTGVKEKEWVMESLIRYIKVIGGPPGREGLLVGLKNG
AILKIFVDNQFPITLLKLSSSVRCLDMSASNNKLAVVNEHNTLLVYDLNSKELLFQEPNA
NSVAWNTQCEDMLCFSGNGYLNIKAGNFPVHQRKMQGFMVGYNGSKIFCLHVCSMSAVEV
PQSAPMYQYLEKKMFKEAYQIACLGVTESDWRDLAIEALEGLDFDTAKKASLHENQRPSE
RKKHGEDKNELFLADIMAYQGKFHEAAKLYKHTGHESKALSMYSDLCMFDYAKDFVGSTD
PKNSRILKTKQADWAQSSKEPRAAAEMYLSAGEHLKAIDIIGEHGWVDMLIDIARKLDKA
EREPLAKCAFYFTNLKQHGYAAETYSKMGDLQALLQLHIETWHWEEAFSFLEKHPQFKND
VYVPYAQWLAENDRFEEAQRAFHKAGRQNEAVKVLEQLTHNAVVENRFSDAGYYYWMLSM
QCLDIARGETPGNWKLQFLPSSLVNSFVVGCHIFYIKFHSGSEDQRKGMLKKFERFQHLA
ELYHVYHSIQRFMDEPFSSHMPETLFNICRFLLNHLHKELPPGISKVLSLMLWRFFPLVF
LDLITGNTLYVLAKQSRHLGAYKLARYCCEKLQDLYIPSCYQQSIELCSLTIRSKPFQDN
EDLTENMMCYRCSTHNPLLNNQGCVCTNCKQPFIYSASSYEVLPLMQFYLEDGIGDEEAV
SLIDLEVPNTDLRETRMHSMDSDDLQVLRRDEGLDDNFEDPFTAKMSFEQGGSDFVPVRV
SRSVLRLMSRRDVLIKRWPVPLQWEYFRSLMPNMSITMCPTCFKMFHSEDYELLVLQHNC
CPYCRRPIDE
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtttatgatataacattcaagccagatggaagccaagtcgtaattgctgctggacaacgt
gttctggtttatgatacagcagatggatctgtcatccaacccttaagcgggcacagtgca
atagtgtattgtgtggattatgctaaagatgggaaacagtttgcttcagggtcagcagac
aaaagtgttatcatctggacatctaagctgcagggtattttaagatacactcacaatgat
tccatccagtccctggcctacaaccctgtcactcaacaacttgcctcctgcacttgtagt
gactttggtctctggtccccagaccaaaaatctgtgagcaaacataaagttagtagcaga
ataacatgctgtgggtggacaaatgatggacagtaccttgctttgggcatgatgaatgga
gttgtgagcattcgtaacaagaacggggaggagaaggttaaaatcgagcgtccgggtgcc
tctcctatctggtccatagcctggaacccttctaaggatgaacacaatgacattctggct
gtaacagactggggccagaagctgtccttttatcagctcagtggaaagcagattggaaag
gacaagttccttacctttgatccgtgctgcattagctactttcccaagggcgagtatatt
gtcttggccggctctgacaagcaggcttcactctacacgaaggatggtgtgcggctgggc
accattggtgagcagaattcctgggtctggacctgccatgtgaagcccgactcaaacttt
gtggtgttgggctgccaggatgggaccattgcctgctaccaaattgtcttcagcacagtt
cacagcctctacaaggatcgctacgcctatagagacaacatgactgatgtcattgtccag
cacctcatcactgagcagaaagtgagaatcaagtgccgtgagttggtcaagaagattgcg
atctataggaaccgtttggccattcagcttcctgtgaagattgtcatctatgagctcact
tcaaacgacgcatcagacatgcactactccatcaaggagaaaatctgtaagaagtttgaa
tgcaacctgctggtggtctgttcccagaacatcatcctttgtcaggagaagaggctccag
tgtctctccttcacaggtgtcaaggaaaaagagtgggtgatggaatctctaatccgctac
atcaaggtgattggcggtcccccaggcagagagggactactggtgggactcaagaatggt
gctatcttaaagatatttgtcgacaaccagtttcccatcacgctcctgaagctatcgtca
tccgtgcgctgccttgacatgagcgcctccaacaataagcttgctgtagtgaatgagcac
aacactctcctcgtgtacgacctcaacagcaaagaactgctttttcaggagcctaatgct
aatagtgtggcctggaacacccagtgtgaggacatgctgtgcttctctggtaatggctac
cttaatatcaaggctggcaattttcctgtacaccagcggaagatgcaaggttttatggtt
gggtacaatggatcgaagattttctgcctccacgtctgttcgatgtccgctgtggaggtg
cctcagtcagcacccatgtatcagtacctggaaaagaagatgttcaaggaagcttatcag
atcgcttgtctgggtgtgaccgagagcgactggagggatttagccatcgaggctctggaa
ggacttgactttgacacagcaaagaaggccagccttcacgagaatcagagaccttcggag
aggaagaagcacggtgaggacaaaaacgagctgtttctggctgacatcatggcctaccag
gggaaattccacgaagcagcaaagctttacaaacacaccggccatgaatccaaagccctg
agcatgtactctgatctgtgcatgtttgactacgcaaaggattttgtcggatcaacagac
cccaagaacagtcggatcttgaagaccaaacaagcggactgggctcagagtagcaaggag
ccccgggcggcagcggagatgtacctgtcagctggagaacatctcaaagccatcgatatt
ataggagagcacggctgggtagacatgctgatagacatagctcgcaaattggacaaggct
gaacgtgaaccgctggcaaagtgtgccttctacttcaccaacctgaagcagcacggttat
gccgcagagacttactccaagatgggagacctgcaggctctgctgcagctgcatattgaa
acctggcactgggaagaggctttctcatttttggagaagcacccacagttcaaaaatgat
gtttatgtgccttatgcccagtggttggctgagaatgaccgctttgaagaagcccaaaga
gcttttcacaaggcagggcgacagaatgaagccgttaaagtcctggagcagcttacccac
aatgcagtggtggagaacagattcagcgatgccgggtactattactggatgttgtctatg
cagtgtctggatattgccagaggtgagacacctggaaactggaaactacagtttctgcca
tcgagtttggtgaattcatttgttgttggctgtcatattttctacatcaaatttcattca
gggagcgaagaccagaggaagggaatgctgaagaagtttgagcgtttccaacatcttgct
gagctctaccacgtctatcactccattcagcgtttcatggatgagcccttcagttcccac
atgcccgagactcttttcaacatctgcagattcctcctcaaccacctgcacaaggaacta
ccacccggcatttccaaagttctatctttgatgctatggcgtttctttccactcgtgttc
cttgacctgattactggtaacaccttgtacgtacttgccaagcaaagccgacatctgggg
gcctataagcttgccaggtattgctgtgagaagctccaggacctgtacattccatcttgc
taccagcagtccatagaactctgcagcctcaccattcgctccaaacctttccaggacaac
gaggacctcaccgagaacatgatgtgctatcgctgctccactcacaaccccttgctgaac
aaccaagggtgtgtgtgcaccaactgcaagcagcccttcatctactccgcctcatcttac
gaggtgctgcctctgatgcagttctacctggaggacggcatcggcgacgaggaggccgtg
tcgctgatcgacctggaagttccaaacacggaccttagagagacacgcatgcacagtatg
gacagcgatgatctgcaggttttaaggagagacgaaggtttggatgataactttgaagac
ccatttacagccaaaatgagctttgagcaggggggttccgacttcgtcccggtcagggtg
agccgctccgtgctgcgcttgatgagcaggagggacgtcctgatcaaacgctggcccgtg
ccactccagtgggaatacttccgctcactaatgcctaatatgagcatcaccatgtgcccc
acctgctttaagatgtttcacagtgaggattatgagctcctggtgctccaacacaactgc
tgtccatactgccgcaggcctattgatgaa
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