Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034442G001
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Entry
GSTEN00034442G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13138
integrator complex subunit 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00034442G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
GSTEN00034442G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Cnd3
Adaptin_N
UNC45-central
Motif
Other DBs
NCBI-ProteinID:
CAG12235
UniProt:
Q4RH97
LinkDB
All DBs
Position
3
AA seq
2070 aa
AA seq
DB search
MNRPKPTTLRRPSAAKPSGHPPPGDFIALGSKTQGGEPKAPAVLLKPASSGLPADRKRET
SSTLPSSSGLSSLAKRPKLSTTPPVSALGRLADVAGVDKRAISPSIKEPSVIPIEVSPVV
LLDEIEAAESEGNDDRIEGLLCGAVKQLKMNRAKPDITLSLSLMFLAKIKPNVFATEGII
EALCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWV
DSSHCKNFVDNIQTAFGTKMPPKSMLLQADTGRSGGDLSAGSSPHPSTPDEDDSQAELLI
AEEKLSPEDEGQIMPRYDELAESVEDYVLDVLKDQLNRRQPMDNVSRNLLRLLTATCGYK
EARLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNTHGADDMEVISSLIKIRLKPKVLLN
HYMLCVRELLNAHRDNLGTMVKLVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVF
QDLLTNKDDYLRASRALLREIIKQTKHEINFQSFCFGLMQERKETSYVDMEFKERFVIQV
TDLLTVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHSVVPTIS
KLGSKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGL
SRDLPLGPADAMELADHLVKRAAGVHSDDLEVLKVERMQLIDAVLNLCTYHHPENIQLPA
GYQPPNLAISTLYWKAWLLLLVVAAFNPQKIGIDLCCRHTTSSVQYFFYIFFNVFILGLT
AWEGYPTLKMLMEMVMTNNYTYPPCTVADEDTKTEMINRELQISQREKQEILAFESHLAA
ASTKQTITENNSLLLSQLTSLDPQGPPRRPPPQVQEQVKTLNQSLRLGHLLCRSRNPDFL
LNIIQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFLLHDAADDSLPIDDDDEGGSKE
QKAKRRQRQQKQRQLLGRLQDLLLGPKADEQTTCEVLDYFLRRLSSSQVASRVLAVKGLS
LVLGEGALKDGEEQDQRMEEDSVDAELLSGYQWLLQDLPKLPLFESVRGMTSTALQQAIH
METDPQMISAYLIYLSQHAPVEEQASHNDLALDVARLIVERSTIMNSLFSKHLCRPESDA
VLCALLNIFSSYIKRMRKTKEGEDLYSWSESQDQVFLRWTTGEMATMHILVVHAMVILLT
LGPPKGESDFYLLLDIWFPDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVSRLVDAAL
QDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVSHDPQTLEQNIMDKHYMAHLVEVQHER
GATGGHTFHSLLKSSLPPDRDSVETSKAKVTVEMSHSSLKMRAAAQLPVIGPDDDLTGIL
VQIFPMKVDPRWHAPPASQFSLALQQALAKELMRAKQGQVQNGGLAFRLLQAIAALLTSA
HAGPVVMSMHRSHALSCPLMRQLHLYQRLVSQDIAFSSLFVKVIVEMLMWLDNPNVEGGP
LKTLLKSFAGQNSPKHMHSDVRTGFLHIAEALELQRDVEVPLRAVIVMLKAGDRCNAEAE
LIVKVLQGLMEVRSPYLEELLSLLMTTGAQSGTAGSVATLISLLLQESEDGAVKKEADLN
NSCEVTKSGLSSGLLVDWLEHLDPEVTSVCPDLQQKLLFALTKARGSPAYRPYLLALLTH
QSNWSSLLQCISTILGKHRDYKLDPSSSLDFLWACSHIPRIWQGRDQKIRQSVYDHAIVY
CSQLDVLVHRLVTLLADVGESKSAESRASDANLACRKLAVSHPVLLLRHLPMIAGLLHSR
IHLNLREFRQQNHMTFFSNVLAILELLQPLVFHGDHQGALQDCHLSFMKVLQNFQRTRSP
LIFINKFLQFTQKYITHNASAAIPYLQKHSDILQVLCAENPDLVQLKSLLAGLTLPVKSS
SAEVAPEERDDDLSSSSLPLVNISASVSLSAADMTLYLKKMSRGEAVEDVLEVLTEVDEK
SRRSPEIIQYFINDLQRLMASSEELCRNMAFSLALRCIQNNPSLATDFLPTFMYCMSSGN
FDVVQTALRNLPEYVLLCQEHADILLHKAF
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcccaagcccacaactctgaggcgccccagcgctgcaaagccttcgggtcat
cctccaccgggagattttattgctctggggtcaaagacacagggtggagaaccgaaagcc
cccgctgtcctcctgaagccagcatcctcgggtctacctgccgaccgtaagagagagact
tcctccacgctgccctcctcatcgggtttatccagccttgcaaagcgtcccaaactctcc
accacccctccagtcagtgctttggggcgacttgctgatgttgcaggtgtggacaaaagg
gcaatatcaccctcaataaaggagccatctgtgatacccattgaagtctcaccagtggtg
ctgctggatgagatcgaagctgccgagtcggaaggaaatgatgatcgcatcgaaggactg
ctgtgtggagccgtgaaacaactaaagatgaatcgggccaaacctgacataacgctctcc
ctcagtcttatgtttctggccaaaattaagcccaacgtttttgccactgaaggaattatt
gaggctttgtgcagtctcttgcgtcgggatgcttcaatcaactttaaagccaagggtaac
agcctggtgtctgttctcgcttgcaatttgctgatggcagcctacgaggaggacgagaac
tggccagaaatattcgttaaagtatacatcgaggattctctgggagaaagaatctgggtt
gacagttctcactgcaagaactttgttgacaacatccagactgcttttgggacgaagatg
ccccctaagagtatgctgctgcaggctgacactggccgctctggtggagatctcagtgcc
ggcagcagtcctcatccatcaacaccagatgaagatgactcccaggcggaactgctaatt
gctgaggaaaaactcagtcctgaagacgaagggcagatcatgcctaggtatgatgaactg
gcagaaagtgtggaagactacgttcttgacgtcctcaaggatcagttaaaccgcaggcag
ccgatggataacgtgtctcgaaacctgcttcgtctgctgacggccacatgtggttacaaa
gaggcgcgtctcatggctgtccagaggctcgagatgtggctccagaacccaaagttgaca
cgaccagctcaggatctattaatgtcgttgtgtatgaactgtaacacccacggagccgac
gacatggaggtcatctccagcctgattaagatacgattaaaacccaaagtgctgcttaac
cactacatgctgtgtgtcagggaactgctgaatgctcacagagacaatctgggcaccatg
gtgaagctggtgatttttaatgaactgtcaaacgccaggaatcctaataacatgcaggtc
cttcacaccgtgctgcagcacagccctgagcaggctccaaagtttttagccatggtcttc
caggacttgttaaccaataaggacgattacctccgtgcctcacgagctttgctgagggaa
atcatcaaacagaccaagcatgagattaacttccagtccttctgctttggtttaatgcag
gagaggaaggagaccagctatgttgacatggagttcaaagagcgttttgttatccaggtc
acagatttactgactgtctcaatgatgctgggcatcacggctcaagttaaagaagctggc
attgcatgggataaaggagagaagaagaatctggaggtgctgagatcttttcagaatcaa
atcgctgccatccagagagatgctgtgtggtggcttcattctgtggttcctacaatcagt
aaacttggttcaaaagactatgtccactgcttgcacaaagtgcttttcacagagcaacca
gaaacctattacaagtgggacaattggcctccagagagcgacagaaactttttccttcgc
ctgtgttcagaggtgcctctgctggaggacacactaatgcgcatccttgttattggactg
tcgagggatttgcctctgggcccagctgatgccatggagctcgcagatcacctggtcaag
agggctgctggagttcactctgatgacctggaggtgctgaaagtggagagaatgcaactt
attgatgcagtgcttaatttgtgcacataccaccacccagagaacattcagctgcctgct
gggtaccaacctcctaatttggcgatatccaccctctattggaaggcatggttgctcctg
cttgttgtggctgcatttaatcctcagaaaataggtatagatttatgttgcagacacaca
acctcatctgttcaatatttcttttacatattttttaatgtttttattttaggcttgact
gcctgggaaggctatcctactctgaaaatgcttatggagatggtcatgacaaataactac
acgtaccctccatgtacggttgcggacgaggacacaaaaactgaaatgatcaacagggag
ctgcagatctcacagcgagagaaacaagagattttggcctttgagagccacctggctgct
gcatccaccaaacagaccatcacagagaacaacagtttgctactgtctcagcttacaagt
ctggatccacagggtcctccgcgtcgaccgccacctcaagttcaggagcaggttaaaacc
ctgaaccagtctctccgtctgggtcacctcctctgccgcagccgcaaccctgacttcctt
cttaacatcatccaaagacaggcctcctcccaatcgatgccgtggttggctgatttggtt
cagtccagtgagggctccttggatgtgctaccagtgcagtgcctttgtgaattcctcctg
catgacgcagctgatgacagcctgccaattgatgatgacgatgagggcggcagtaaagaa
cagaaagcaaagaggagacaaagacagcagaagcaaaggcaattgctcggacgcctccag
gatctgttgttgggtcccaaggccgatgaacagacgacatgtgaagtgctggactacttt
ctgcgccgcctcagctcttctcaggtggcctcgagggtgttagctgtgaagggtttgtct
ttggttctgggagaaggcgccttgaaagatggagaggagcaagaccagcgtatggaagag
gactctgtggacgctgagctcttgtctgggtaccagtggctgttacaagacctcccaaag
ctccctttatttgagagtgtcagaggcatgacatccactgctctacagcaggcgattcac
atggaaacggatccacagatgatcagtgcttaccttatttacctatcccagcatgcacca
gtggaggagcaggcatctcataatgacctggctctggatgtcgcccggcttattgtggag
cgctccactatcatgaacagtttgttctccaaacatttgtgcaggcctgagtctgacgct
gtgctctgtgctttactcaacatcttctcctcttacattaagaggatgaggaaaactaaa
gagggagaggatctctacagctggtcagagtcccaggatcaggtgtttctgcgttggact
actggggagatggccaccatgcacattctggtggtccacgccatggttatcctgctgact
ctggggcctcccaaaggtgagagcgatttctaccttcttttggacatttggtttccggac
aagaaacctctgcctactgccttcctggtggatacctcagaggaggcccttcttctccct
gattggttgaaactgaggatgatccggtcagaggtttctcggctggttgatgcagcactt
caagatctggagcctcagcagttgctgctgtttgtacagtcttttggcattccagtatcc
agcatgagtaaactgcttcagtatttggatcaggctgtctcccatgatccacaaacactg
gaacagaacattatggacaagcactacatggcccacctggtagaagtgcaacacgagcga
ggtgccactggggggcacacttttcattcattactgaagtcttctctccctccagataga
gattctgttgaaacaagtaaagccaaggtgacagtggaaatgtcccacagctctctgaaa
atgagagcagctgctcagcttcctgtcattgggcctgatgatgatctgactggcattctt
gtgcagatattccccatgaaggtggaccctcgttggcacgccccccctgccagccagttc
tctctggccttgcagcaggccctggctaaagagctaatgagggccaagcagggtcaggtc
cagaacggaggcttggcgtttcggctccttcaggccattgcagccctgctcacctccgct
cacgcaggtcctgtcgtcatgtcaatgcaccgcagccatgcgctctcctgtcctctgatg
cggcagcttcatctctaccagcgtctggtgtcccaggacattgcgttctcctcgctgttt
gttaaggtgattgttgaaatgttgatgtggttggacaacccaaatgtggaaggaggacca
ttgaagactctactcaaatcctttgctggtcagaattctcccaagcacatgcacagcgac
gtgcgtacaggttttctccacatcgctgaggctttggaacttcaaagagatgtagaagta
ccgctgagagccgtcattgtgatgctgaaagccggagacagatgtaacgcagaagcagag
cttatcgtaaaagtgctgcaaggcctgatggaggtcaggtcaccgtatttggaagagctg
ctctctctgttgatgactacaggtgcacaaagcggtacagccggctctgttgccacactc
atttccctgttgctgcaggagagcgaggacggagctgtgaaaaaggaagcggatttaaac
aacagctgcgaggtgacaaagtcaggactaagttctggactgctggttgactggctcgag
catctggatcctgaagtcacttcggtgtgtcctgaccttcaacagaaactgctgttcgct
ctcaccaaggcacgaggaagtcctgcatacaggccttatcttttggccttgctcacacat
cagtcaaactggtcctcccttctgcagtgtatcagcactattctcggcaagcacagagac
tacaaactagacccatcctcatctttggattttctttgggcgtgcagtcacattccacgt
atttggcaaggtcgtgaccaaaagatccgtcaatcagtgtacgatcatgccattgtgtat
tgttctcagcttgatgtcctggtacatcgcctggtcacactgctggctgatgtaggagag
tcaaagtctgctgaaagtcgtgcgtcagacgccaaccttgcttgtcgtaagctggctgtg
tctcaccccgtcctgttactcagacatctgcctatgattgcaggtcttttacacagtcgt
attcatttaaacctgcgggagttcagacagcagaaccacatgaccttcttcagcaacgtg
ctcgctatattggagctgctgcagccgctcgttttccatggagaccaccagggggcgctt
caggactgtcatctctccttcatgaaggtccttcagaactttcagaggactcgctcgcca
ttgatcttcatcaataagtttttgcagttcacgcagaagtacatcacccacaatgcttca
gcagccattccttatttacagaaacactctgatatcctacaggttctttgtgctgaaaat
ccagacctggtccaactaaaatcacttctggctggactcacgctgccagttaaaagttct
tctgcagaagttgcaccggaagagagggatgatgatctatcctcaagttctctccctctt
gtgaacatatcggcgtcagtatcacttagtgccgcagacatgacgctgtacctgaagaag
atgtcgcggggcgaggcggtggaggacgtgctggaggtgttgacagaagtggatgaaaag
tcgaggagaagcccagaaatcatccagtacttcattaacgatctgcagagactcatggct
tcatctgaggagctgtgtaggaacatggccttcagcctggctctgcgctgcatccagaac
aatcccagcctggcaacagacttcctgcccaccttcatgtactgcatgagcagcgggaac
tttgatgtggtgcagaccgccctcaggaatctgccagaatacgttcttctgtgtcaagaa
cacgcagacatcctcctccacaaggccttc
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integrated database retrieval system
