Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034747G001
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Entry
GSTEN00034747G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12173
BRCA1-A complex subunit BRE
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00034747G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00034747G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00034747G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00034747G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
GSTEN00034747G001
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
GSTEN00034747G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
GSTEN00034747G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
GSTEN00034747G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-ProteinID:
CAG12462
UniProt:
Q4RGM0
LinkDB
All DBs
Position
10
AA seq
264 aa
AA seq
DB search
MEDDHYLQQNISMDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYAPQVCQLLTSKMKYLRIEEVEIPQDERTDTKWRHIHRWAGILARPVYL
AYVIRRFRQPMKSQEEGNPFMVQYIIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTL
LLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQVQKSYPYSPRWDGNEMA
KRAKAYFKSFIPQFQEGAFANGKL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaccactacctgcagcaaaacatctccatggacacagcattggaccctgga
gaagatgtagcccttctgtcagtaagctttgaggatgctgaggctacccaagtctttcca
aaactttatctttcccccagcattgaacacgccctgggaggctcttcagccctgcacatc
ccagccttccccagtggaggatgcctaattgactatgctcctcaagtgtgtcagttactc
accagcaagatgaaatatctgagaattgaagaagttgaaattccacaagacgagcgcacc
gacacaaaatggaggcacatccacaggtgggctggaatactcgcacggccagtttacctg
gcttacgtcattcggcgcttccggcagccaatgaaaagccaggaggagggaaatcctttt
atggtgcagtacatcatccaaggatatcacaagaggagggagtacatcgctgctttcctc
agtcactttggaacgggcgtggtggagtacgatgcagaggggtttaccaaactcactctt
ctcctcatgtggaaggacttttgcttcctcgtgcacgtggaccttccactgtacttcccc
agggaccagcccaccctcaccttccagtccgtctaccacttcaccaacagtgggcagctc
tactctcaggtgcagaagtcttacccctacagtcctcgctgggacggcaatgaaatggca
aagagggccaaggcatacttcaagagctttatccctcagttccaagagggagcatttgcc
aatgggaaactctag
DBGET
integrated database retrieval system
