Thioalkalivibrio nitratireducens: TVNIR_2014
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Entry
TVNIR_2014 CDS
T02408
Name
(GenBank) NADPH-dependent glutamate synthase beta chain - like protein
KO
K15022
formate dehydrogenase (NADP+) beta subunit [EC:
1.17.1.10
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00680
Methane metabolism
tni00720
Other carbon fixation pathways
tni01100
Metabolic pathways
tni01120
Microbial metabolism in diverse environments
tni01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
TVNIR_2014
00680 Methane metabolism
TVNIR_2014
Enzymes [BR:
tni01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
TVNIR_2014
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
NAD_binding_8
Pyr_redox
FAD_binding_3
DAO
Amino_oxidase
Pyr_redox_3
Fer4_21
FAD_oxidored
Thi4
FAD_binding_2
NAD_binding_7
Fer4
HI0933_like
NAD_binding_9
MurD-like_N
Fer4_7
GIDA
Fer4_2
AlaDh_PNT_C
3HCDH_N
Fer4_6
Fer4_10
Lycopene_cycl
Fer4_16
MCRA
Fer4_9
ApbA
Motif
Other DBs
NCBI-ProteinID:
AGA33675
UniProt:
L0DXI4
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Position
2056086..2057777
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AA seq
563 aa
AA seq
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MIEIPRGAFARPGTSLDFKTGTWRVERPVHQRRAAPCHSACPAGEDAQAYLAKAEVGDLR
GAWETLVAANPLPAITGRVCHHPCESACNRRHYDDAITIHGVERFLGDRALHEGWAYPVA
APGSEAPRVAVVGAGPAGLSAAYHLLRNGCRITLIDAMPAAGGTMRTAIPRYRLPTEILD
QELDRIVALPGIDFRPQTRLGRDISLQELQAEHQALFLGPGRRKGREWSADFAVPGDLHT
GLQLLEAWVAEGTLPDQPRSVAIVGGGNTAVDLARVLRRQGVEQVHLISHQRVPAPDVPA
DDAMRATSREVSQAIEEGVTIHEHRGVRRLILRGERVVGMELVHMKKLVGQDGRLRRVAF
EGTETVLHVDHVIPAIGQDVDPEGFNGLVERGQMNVEPWWGELRGHPNIFSGGDARSDHG
TVSEAVGDGRRAALGIMRRLSAQPLDPGAPPEPIPFDDLNVHYFEPLPAAREPVLPPEHR
KGLEEIEGGLDGSGVRNEAHRCLSCGDCLACDNCWTLCPDQSVLKTREIAADGSHYVFDY
DYCKGCGICAHECPTGYIRMIPE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattccccgcggcgccttcgcccgtcccggcacctccctcgacttcaagacc
ggcacctggcgggtggagcggccggtgcatcaacgccgcgctgctccctgccattcggcc
tgcccggccggcgaggacgcccaggcctacctggccaaggccgaggtcggggacttgcgc
ggtgcctgggaaacgctggtcgcagccaacccgttgccagcgatcaccggaagggtctgc
caccacccctgcgagtcggcctgcaaccgccggcattatgacgacgcgatcacgatccac
ggcgtcgagcgtttcctgggcgatcgcgccctgcacgagggttgggcgtatccggtggca
gcgcccggttccgaggcgccgcgggtcgcggtggtcggcgccgggccggcggggctttcg
gccgcttaccacctgctgcgcaacggctgccgtatcacattgatcgacgcgatgcccgcc
gcgggcggcacgatgcgtaccgcgatcccccgctaccgtctgccgaccgaaatcctcgat
caggaactggaccggatcgtcgcgctgcccggtatcgacttccgcccgcaaacgcggctc
ggacgcgacatctcgctgcaggaactccaggccgagcaccaggcgctgtttctcggtccc
gggcggcgcaagggtcgtgaatggagtgccgatttcgcggtgccgggagacctgcacact
ggcctgcagttgctcgaggcctgggtcgccgagggaacgctgcccgatcagccgcgctcg
gtcgcgatcgtcggcggcggcaacaccgcggtggacctggcgcgcgtgctgcgccgccag
ggcgtggaacaggtccacctgatcagccaccagcgcgttccggcaccggatgtccccgca
gacgacgcgatgcgggccacgtctcgcgaggtctcccaggcgatcgaggaaggcgtgacc
atccacgagcaccgcggcgtacgccggctgatcctgcgcggcgagcgggtcgtcggcatg
gaactcgtgcacatgaagaaactcgtgggccaggacggacgcctgcgccgggtcgcgttc
gagggcaccgagaccgttctccacgtcgatcacgtgattccggcgatcggccaggacgtc
gaccccgaggggtttaacgggctggtcgagcgcggccagatgaacgtcgaaccgtggtgg
ggcgaactgcgcgggcatccgaacatcttcagcggcggtgacgcccgttccgatcacggc
accgtcagcgaggcggtcggcgacgggcgacgggcagcgctggggatcatgcgccggctt
tccgcgcagcccctggatccgggggctccacccgagccgatcccgttcgacgatctcaac
gtgcactacttcgaaccgctgccggcagcccgggaaccggtgctgccgccggaacaccgc
aaggggctcgaggagatcgagggcgggttggacggcagcggcgtgcgcaacgaggcccac
cgctgcctgtcgtgcggcgactgcctggcctgtgacaactgctggaccctgtgcccggac
cagtcggtgctgaagacccgcgagatcgccgccgacggcagtcactacgtgttcgactac
gactactgcaagggctgcggtatctgtgcccacgaatgccccaccggctacatccgcatg
atcccggagtag
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