Thioalkalivibrio nitratireducens: TVNIR_2922
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Entry
TVNIR_2922 CDS
T02408
Name
(GenBank) Secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni01501
beta-Lactam resistance
tni01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TVNIR_2922
01503 Cationic antimicrobial peptide (CAMP) resistance
TVNIR_2922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tni03036
]
TVNIR_2922
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tni02000
]
TVNIR_2922
01504 Antimicrobial resistance genes [BR:
tni01504
]
TVNIR_2922
Chromosome and associated proteins [BR:
tni03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
TVNIR_2922
Transporters [BR:
tni02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
TVNIR_2922
Antimicrobial resistance genes [BR:
tni01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TVNIR_2922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
MscS_porin
OEP
Motif
Other DBs
NCBI-ProteinID:
AGA34559
UniProt:
L0DY79
LinkDB
All DBs
Position
3006086..3007291
Genome browser
AA seq
401 aa
AA seq
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MTRLLLAFVTLAALAGAGIFWWLEREPEPAGARPAAAARPVAVETVAVQTRDLVRELFLT
GSLEASRRIEVMPRLGGRIERIPVEIGDTVVPGDLLLQLDPEEFQQDLLQAEAEFAVAQA
GLGEARESLNAARRELTRVRELHGQGIASAAELEAAQTQVALQQTRVELAQSQLRSREAA
RRSTQIRAEFTRVRADWENGLPRHVAERLADPGALVAANTPVLTLVALDPLRAVVFVTEA
DYGRLRAGQPVRLRTAAWPGETFTGRVTRIAPEFREASRQARVEIEVPNPELQLRPGMFA
EIAIELERRLGAQSVPRDALLQREEGFVLFTVDPATDPPQARRHRVTPGIRDGDWVEIVE
PELSGAVVTLGQHLLSEDTPVRLQGAGGTAPRGKPDAAPGR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcctgctcctcgctttcgtgacgctcgccgcgctggccggggcggggattttc
tggtggttggaacgcgagcccgaacccgccggggctcgtcccgccgcggcggcccggccg
gtcgctgtcgaaaccgtggcggtgcagacgcgcgacctcgtccgcgaactgtttttgacc
ggttcgctggaagcctcgcggcgcatcgaggtgatgccgcgcctcggcggccggatcgag
cggatcccggtcgagatcggtgacacggtcgttcccggcgacctgctgctgcagctcgat
cccgaggagttccagcaggacctgctgcaggccgaagcggagttcgcggtcgcgcaggcg
ggcctcggcgaggcgcgcgagagtctgaacgcggcgcgccgcgagttgacccgggtgcgc
gaactgcatggccaggggatcgcttcggccgcggaactcgaggcggcgcagacgcaggtg
gcgctgcagcagacacgcgtcgagctggcgcagtcgcagctgcgcagccgcgaggccgca
cgacgcagcacgcagatccgggcggagttcacccgggtccgcgccgactgggagaacggc
ctgccccgccatgtcgctgagcgtctcgccgaccccggcgcgctggtggcggcgaacacg
ccggtgctgacgctggtcgcgctggacccgctgcgtgccgtcgttttcgtcaccgaggcg
gactacggccggctgcgcgcggggcagccggtgcgcctgcgcaccgccgcctggcccggc
gaaacgttcaccggtcgcgtgacccgcatcgctccggagttccgcgaggcttcccggcag
gcccgggtcgagatcgaggttccgaacccggaactgcagctgcggccggggatgttcgcc
gagatcgcgatcgagctcgagcgccggcttggtgcgcagtccgttccccgcgacgcgctg
ctccagcgtgaagagggcttcgtgctgttcaccgtggaccccgccaccgaccctccgcag
gcccgcaggcaccgggtgacgccgggcatccgcgacggcgactgggtggagatcgtcgag
ccggagctttccggcgcggtcgtgacgctcggccagcacctgctttccgaggacaccccg
gtgcgcctgcagggggccggcgggacggcaccgcgcggcaaacccgacgcggcgcccgga
cgatga
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