Trichoplusia ni (cabbage looper): 113494800
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Entry
113494800 CDS
T05757
Name
(RefSeq) dosage compensation regulator-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113494800
03012 Translation factors [BR:
tnl03012
]
113494800
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113494800
5.6.2.6 RNA 3'-5' helicase
113494800
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113494800
Translation factors [BR:
tnl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113494800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
nSTAND3
Dicer_dimer
DND1_DSRM
AAA_19
ATPase
NACHT
Motif
Other DBs
NCBI-GeneID:
113494800
NCBI-ProteinID:
XP_026729073
UniProt:
A0A7E5VL67
LinkDB
All DBs
Position
6:4461040..4476354
Genome browser
AA seq
1316 aa
AA seq
DB search
MDAKSFLYSWCAKKGLTPNYDVRATGPKHRQRFLCEVRVDTFSYAGAGNSMTKKEAQMNA
SKDFISYLVRTGDLAPGDVPEDTRAPVVKTEDNDNIQGQDSLPQQQQRPVFQEGMGPDMM
GPAYHAYGGQNENFTYMNRLQQQKNVEEAEDLDVNASLHGNWTMENAKSKLHQFLQINKI
NTDYVYKAVGPDHTRSFCCELSIFVRQLGRNVTGRETASNKQTASKSCALSVVRQLYHLG
VIEAFSGTLKKDRSGEGIMKPYPVAISPALEQQLEETLKELEIEPVQVDLSGHYSSEDGQ
SGLTLLQMDRVKAMREARPTPGGVVSWSPPKPNWNAWTGCNIDEGPLATTSLEDISADLE
KRHRDMCQNSTLYQESLREREKLPVYGMKSQIMEAINENPVIIIRGNTGCGKTTQVCQFI
LDDYIASGQGAWANVCVTQPRRISAVSVAERVASERCEDLANSVGYSVRFESFLPRPYGS
IMFCTVGVLLRKLEGGLRGVSHVLVDEVHERDADTDFALILLRDMAHTYPDLRIILMSAT
VDTTLFTQYFGNCPVIEVPGRTFPVKQYFLEDCVELTKFVPPPDTRKRKASGKKANSTNN
DDDDDDEGGAEEQDEDLNKNCQLSSNYSPETSQTMAKLSEKDLSFELIEAILQYISSLGS
DGAVLVFLPGWNLIFALAKHLSQHRVFGDTSKYVILPLHSQIPRDDQKKVFITPPPGMVK
VILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASRTNLEQRKGRAGRV
RPGVCFTLCSRARYDKLDEHQTAEMFRTPLHELALSIKLLRLGSIGHFLSKAPEPPPLDA
VIEAEALLRELACLDAGDNLTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAANST
TFPEIFIVEGRRRLSNHQRALAGDRASDHVAMLNAFQMWEREHAKGEDAEMRWCEWKGLQ
PTTMRVTSEAKYQLTNILTTTIGFSEECCVPQRWHPTGSDPTLDLVIALMCMGLYPNVCL
HQGKRKVLTTEGKPAVIHKTSVNCSNQEQRFPCPLFVFGEKVRMRAISCKQTTMVAPLHL
LLFACRKVEWIDNVVRLDNWLNFDMKPSTAALVIALRPAVEKIVERAAAEPDAALHFSPI
EQKVIDCVKSLCIVDAGDYNIQRETSTPTFRMDGAKRGNRGWGTTGPRGGFGGQGFGANQ
GFGGNRGGFGGTRGGFGGNRGGFGSGNQGGFGNEGQGGFGGGFQGGFRGSGGFGSNQGGF
GGNQGGFGDNQGGFGSNQSGNGFGRGGFGSRGFGNTGFGNRGYGNSGFRRGGRGYW
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaatcatttctttactcttggtgcgcgaagaaaggattaacgccgaactac
gatgtgcgggccacagggcccaaacatcgtcaacgtttcctctgcgaggtccgagtcgat
actttctcgtacgccggagctggcaactccatgacgaaaaaggaagctcagatgaatgct
tccaaagacttcattagttatcttgtacgtactggtgacttggcacctggagatgtaccc
gaggatactagggctcctgtggttaaaactgaagataatgataatatccagggtcaggat
tcacttcctcagcaacaacagagacctgtgtttcaggagggaatgggaccagatatgatg
ggtcctgcttaccatgcatacggtggtcaaaatgagaactttacatatatgaatcgttta
caacaacagaaaaatgtagaggaagctgaagacttagatgttaatgccagtttacatggt
aactggacgatggaaaatgccaagtctaaactacaccagttcttacagatcaataagatt
aatacggactatgtttataaagcggtcggtccggatcacacacggagtttctgctgcgag
ttgtctatatttgtacgtcagttgggccgtaacgtaaccgggcgtgagaccgcgtcgaac
aagcagacggcgagcaagtcctgtgctctgtctgtcgtaaggcagctttaccatctcggt
gtgattgaggccttcagtggcacgctgaagaaagacaggtctggagaaggtattatgaag
ccttatccggtggccataagcccagcactggaacaacaactggaggagacactaaaagaa
cttgaaatagaaccagtacaggtggacctgtctggtcactactcgagtgaggatggtcag
tcagggctgaccctgctccagatggaccgcgtgaaggccatgcgagaggcccgccccacc
cccggcggcgtcgtgtcctggtcaccgccgaaacccaactggaatgcgtggactgggtgt
aatattgatgaagggccactggctacgacaagtcttgaggacatcagcgctgaccttgag
aagcgccacagggatatgtgccagaatagtacattgtatcaggaaagtttacgcgaaagg
gaaaaactaccggtgtacggtatgaagtcgcaaatcatggaggctatcaatgagaaccca
gtcatcatcatcagaggaaatactggctgtggaaaaactacacaggtatgccagttcatc
ttagacgactacatagcgagcgggcagggcgcgtgggccaacgtgtgcgtgactcagccg
cgacgtatctccgccgtcagcgtggccgagagggtcgccagcgagcgctgcgaggacctg
gccaatagcgtgggctactcagtccgcttcgagtccttcctgccgcgtccatacgggtcc
ataatgttctgtaccgtgggagtactgctacgtaagctcgagggtggtctacgtggagtc
agccacgtccttgtcgacgaggttcacgagagggacgctgacaccgacttcgctcttatc
ctcttaagagatatggcccatacgtacccagatttgaggatcattctcatgtcggcaaca
gtcgatactactttgttcactcagtatttcggaaattgtcctgttattgaggtgccaggc
cgcacgttccccgtaaagcaatactttctagaagactgtgtcgagctaactaagttcgtg
cctccgccagacacgcgcaagcgcaaggcatccggcaagaaggcaaacagcaccaataat
gatgacgacgatgatgatgaaggtggagcggaggaacaagatgaagacttgaacaagaac
tgtcaactgtccagcaactactccccggaaacatcacaaaccatggccaagctctctgag
aaagatctaagtttcgaacttatcgaagcaattctacaatatataagcagcttgggaagt
gatggcgctgtgttggtgttcctccccgggtggaaccttatcttcgcgttggccaaacat
ttgtcccaacatcgagtgtttggcgacacgtctaagtatgtgatactgccgctacacagc
caaatccccagggacgatcagaagaaagtgtttattactccaccgccgggtatggttaag
gtgatattatcaacgaacatagcggagacatcgatcacgatcaacgacgtcgtctacgtg
atcgactcgtgcaaggccaagatgaagctgttcacgtcacacaacaatatgacgtcatac
gccactgtctgggccagcaggactaatctggaacagcgtaaaggtcgcgccggtcgtgtc
cgccccggcgtttgcttcacgctgtgctctcgcgcgcgctacgacaaactcgacgaacat
caaactgctgagatgttccgcacaccactacacgaactggctctgagcatcaagctgctc
cggctgggcagtatcgggcacttcctgtcgaaggcccccgagccgccgccgctggacgcc
gtcatcgaggccgaggcgctgctgcgggagctggcctgcctcgacgcgggggacaacctc
acgccgctcgggaccatactcgccaagctgcctatagagccgcgtctaggcaagatgatg
gtgctgggcttcgtgttgggcgtgggcgacgctcttaccacaatggcggccaactcaacg
accttcccggagatcttcatagtggagggtcgccgtcgcctgtccaaccaccagagggcg
ctagcgggggacagggcgtcggaccatgtcgccatgctgaatgcttttcaaatgtgggaa
cgagagcacgcgaagggcgaggacgctgagatgcgctggtgcgagtggaaggggctgcag
cccaccaccatgagggtcacctccgaggccaagtaccagcttactaatatcctaacaaca
acgataggtttctccgaagagtgttgtgtgccacaacgctggcaccccaccggttcagac
cccaccttggacctggtcatcgcgctcatgtgtatgggactctaccctaatgtgtgctta
catcaggggaagagaaaggttctgacgacggaaggcaagccggcggtgatccacaagaca
tcggtgaactgcagcaaccaggagcagcgcttcccgtgtccgctgttcgtgttcggcgag
aaggtccgcatgcgcgccatctcctgcaagcagaccaccatggtggcgccgctgcatctg
ctgctgttcgcctgcaggaaggtcgagtggattgacaacgtggtccgcctggacaactgg
ctgaacttcgacatgaagccgagcacggcggcgctggtgatcgcgctgcggcccgccgtc
gagaagatcgtcgagcgcgccgccgcagaacctgacgccgcgctacacttctcgcctatt
gaacaaaaggtaatcgactgcgtgaaatcgctatgcatcgtggacgcgggcgactacaac
atccagcgcgagaccagcacaccgacgttcaggatggacggcgccaagcgaggcaaccgc
ggctgggggaccaccgggccccgcggcggcttcggcggacaagggttcggcgccaaccag
ggcttcggcggaaacagaggtggattcggcggaactagaggcggctttggcgggaaccga
ggcggttttggaagcggcaatcagggcggcttcggcaatgaaggtcaaggtggcttcgga
ggtggattccagggcggtttccgaggttcaggcggtttcggcagcaaccaaggaggtttt
ggcggtaaccaaggtggtttcggcgataaccaaggtggtttcggtagcaaccaaagtggt
aacggtttcggccgcggtggatttggcagccgagggttcggtaatacaggtttcggaaac
cgcggctatggtaacagtggctttagaagaggcggacgcggatattggtga
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