Trichoplusia ni (cabbage looper): 113496930
Help
Entry
113496930 CDS
T05757
Name
(RefSeq) agrin-like
KO
K06254
agrin
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04512
ECM-receptor interaction
tnl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113496930
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113496930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tnl00535
]
113496930
Proteoglycans [BR:
tnl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
113496930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
EGF_laminin
Kazal_CFAI
EGF
Laminin_G_3
hEGF
EGF_2
EB
Motif
Other DBs
NCBI-GeneID:
113496930
NCBI-ProteinID:
XP_026732130
UniProt:
A0A7E5VUW2
LinkDB
All DBs
Position
8:15362941..15413363
Genome browser
AA seq
2043 aa
AA seq
DB search
MNRPGYDYTVPASTTYYASNNRPPQYERGYGQLTAGPLYSPSSHPLSNYADVYEGNNDTT
LRAEERHWYIENHKNLQPNYEISDAVPQDAKVKKEEEKKTEVPVRRSEAGQARQRRKEDR
CSCECWPSTDNNIVQDSAGNETTRSLSGVDMVASYGVYGNPRDDDSSGFARLSEKSAVYG
QGSDAPVQGVIVNQQGNSAVVRAASPAQTTCGRCCSWSSSPPAANSEDYCWIHYCRPALI
VLLLLFFLVLLGVSTGFLLTNNYLHYQPRPPAPEEACEKTFCRWGAECVSLGDGRAHCAC
PATCPVSPAPVCSTAGRTYRNHCYLRKEACERRLNLRVKHEGECDAGDPCTGVSCPVGAR
CVAAYGQPECRCPRSCQRRKPVCGTDGREYASVCHLDKHACDNQLNITIKYHGKCDPCSE
HECPDGGVCQLNEARAPVCKCGPPCDLLVRPGSAVCGSDYRDYPSECALRRESCRTRHQL
TIAYRGECASAQHPCDSVKCGSREHCSLDARGVAVCGCGADCEPVVRPVCGTDGHTYDSR
CHLDRASCLDNRDLRVAYTGPCGVENPCARASCPWGGACVARGGAAQCACPVCDATLTPV
CASDHNTYGSECKMRMHACQEGVADGKLKVLYNGTCQTCSDIMCKGGGDCVVDADTGRPT
CRCNHNCTEAQESDVVCGSDGQTYPSQCELDSTACREQSDLRLAYKGDCALCEGVQCAFG
AHCSAGECICPTDCTGAAREPVCGSTMQTYPNECELQKAACRLPPPATLHVIFYGDCKDR
LAVVPPIAMTTTAMTTTEAEDGSTDAWSATDQDGSANSSACRDIRCDFGASCEIGSDGYP
RCSCLFECTHDNEYFPVCASDFRLYTSLCAMRKEGCQKQLELRLRPLDLCKGMEVRPCGN
NKAMVDHTTGLEIDCGNGPHRQDCPVGSYCHITLTAARCCPKNDSRQSEEKKISHCSETS
YGCCSDGSTAATGPNEEGCPITSSTCGCNRLGSVSDRCDEDGQCVCRPGVGGLKCDRCEP
GYWGLPRIGSGHTGCIPCGCSAFGSVREDCEQMTGRCVCRTGVQGQKCTVCADHRRRLGP
NGCSDPETGGVVSSCAELSCYFGAVCTERTGGALCECAAAPCSDSDTNMLVCGSDGKTYE
SECHLKLQACRTQEDIVVQAFGPCKLGEVAGTAGPPRPSSPIQFTQQDDGAASKSTRHLL
NPDKYYNKYDWTRKETPSDFDSILSGQKFKATTATVGSGSVGALLGDLCADDADCAALPG
AECSRAACVCRAGHVPTMHRKACVEQVPQETTEEYSACLSEPCYNLGTCIDLPGSTYTCL
CAGPYTGLNCESLAKDGLLGSYIETPSFDGTSYIRLKPLKAYHKLNIDIEFKAFSENGVI
LYNQQKPDGTGDFVSLALVNGYLEFRYNLGNGVLILTSLEKITLNEYHKVSAKRYHRDGI
LSVDDMEDVVGQSSGHLKALDLNEDAYIGSVPTNFSRVFDNIGTRSSFIGCVKSLRIIRH
QVTKKLGRPDSLVVAIENVQECQSSPCMSMPCKNGATCKSVDGSTTEYTCSCPIGFQGAN
CDERLDPCESNPCGYDEGLLCDIGADGGHVCRCLFGGEIGSNGNTCNNDVTVVQETWSPQ
FNGTSYVELPPLEGLGKAFRIEIWFLTNRFSGMLLYTGQSNKAKGDFVAINLVNGHLQFR
FNLGSGIANITSPVPITKGRWHRARVSRYGRHGSLQLDHHPTQRGNSAPPLTHLELTLPL
FIGSLPSYIRPHKMSGVTSSFIGSVQQVFVNGNPLSLYGADTAKCSIVQDEDRLPCATTG
VTKYTGPPCGEELTPCKNNGSCIPLLNEYKCICRDGYQGRNCEVQINVEMLNERTPVKFD
GNNYFSYRSRGSRRNSGVRGIRYEIKFRTFNDSGLLMWRRKIGIRPRDFVGLGLSEGKLQ
LIYTDTDIKEMNLASHEDWFQCVESKARVDDGRWHTATVRRRKRLAMLQVDDTPPVRGYS
QSLLVPSKSNPKLWIGGSPSLPLGLPAALYTGLRGCVASIKANGRHIDLSAPIRPTSTVR
HCD
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggccgggctacgattataccgtgcctgcatccaccacctattacgcgagtaat
aaccgaccaccgcaatacgagcgcggctacgggcagctaacggctggtcctctctacagt
ccctcctctcatccgctctccaattacgcagatgtatatgaaggaaacaacgatactacc
cttagggcagaagagagacactggtacatagagaaccataaaaatttacaacccaactat
gaaattagtgacgctgttcctcaagatgccaaagttaagaaagaggaggagaagaaaacc
gaagtaccagtccgacgttctgaggcgggccaagctcggcaaaggcgaaaagaggaccgg
tgctcgtgcgagtgctggcctagtaccgacaataatatcgtgcaagatagtgcaggaaat
gagacgacgaggtcactgtcgggagtcgacatggtggcctcgtacggcgtatatggaaac
ccgagggatgacgacagttctggttttgcacgactgtcggagaaaagtgccgtatatgga
caagggagcgatgctccagtgcagggtgtgatagtgaatcagcaagggaacagtgcggtg
gtacgggcggcgtcgccggcgcagactacttgcggccggtgctgttcgtggtcgagcagc
ccgcccgccgccaactctgaagactactgctggatccactactgccgccctgcgcttata
gtcttactactattgttttttctagtcctcttgggcgtttctactggtttcttactgacg
aataactatttacactatcaacctcgaccccctgctcctgaagaagcttgtgaaaaaacg
ttttgtcgttggggagcggagtgtgtgtccctcggggacggacgtgcccactgcgcctgc
cccgcgacttgccccgtgtccccagcgcccgtgtgctcgaccgcgggccgcacctaccgt
aaccattgctacctgcggaaggaagcctgcgaacgacgactaaacttacgcgtcaagcat
gaaggcgaatgtgacgcgggagacccctgcacaggtgtgtcttgcccagtgggcgcccga
tgcgtcgcggcttacggtcaaccagaatgtagatgtccccgcagttgccaacgacgaaag
ccagtgtgcgggaccgacggccgggagtacgcatctgtgtgccatctcgacaaacatgcc
tgtgacaatcaacttaacatcacgattaaatatcatggaaaatgcgacccgtgctcggaa
cacgaatgccctgatggcggcgtgtgtcagttaaatgaagcgcgcgcgccagtctgcaag
tgtggtccgccgtgcgacctgctggtgcggcccggctccgccgtgtgcggctcggattac
cgggactacccgagcgagtgcgctttacgacgagagtcctgtcgaacgcgacaccaactc
accatcgcttacagaggagaatgcgcttccgctcaacatccatgcgactctgtgaagtgc
ggttctcgtgagcactgttcgctggacgctcgcggcgtggcggtgtgcgggtgcggcgcg
gactgcgagccggtcgtgcggcccgtgtgcggcacggacggacacacgtacgacagccgc
tgccacttggaccgggcctcgtgtctggataatagagacttgcgagtcgcgtatactggg
ccttgcggtgtagagaacccatgcgcccgcgcgtcatgtccgtggggcggcgcgtgcgtg
gctcgcggcggcgcggcgcagtgcgcgtgccccgtgtgcgacgccacgctcacgccggtg
tgcgcgtccgaccacaacacatacggctccgagtgcaagatgcgcatgcatgcctgccaa
gagggcgtcgctgatgggaaactaaaagtgctctataatggaacctgccagacttgctcg
gacatcatgtgcaaaggcggtggcgactgcgtcgttgacgccgacaccggccggcccaca
tgtcgctgcaaccacaactgcacggaggcgcaggagtctgacgtggtatgcgggagcgac
ggccaaacctacccatcgcaatgtgagctggactcgacagcgtgtcgcgaacaaagtgat
ctgcggcttgcctacaaaggcgattgcgcactatgcgaaggggtacaatgtgcatttgga
gcacattgctcagctggtgagtgcatatgtcctactgactgcactggcgccgcccgagaa
ccggtctgcggcagcacgatgcagacttatcccaatgagtgtgaactacagaaagcagct
tgtagactgccacctccagcaacactacacgtcatcttctacggagactgcaaggacaga
ctagctgttgtaccaccaattgctatgacaacgaccgcgatgaccacgacggaggccgaa
gacggttctacggacgcttggagtgcgaccgaccaggacggctcggccaactcgtccgct
tgtcgcgatatccgctgcgactttggggccagctgcgaaattggctccgacggatatccc
cgctgttcctgcctttttgaatgcacacatgataacgaatatttccccgtgtgtgcgtcc
gacttcagactctacactagtctgtgcgctatgcgcaaagaaggttgccaaaaacaactt
gaactaagacttcggccgttggatctatgcaaaggtatggaagtaagaccctgcggtaat
aacaaagcgatggtcgatcatacaactggcctcgaaatagactgtggtaacggcccacac
cgacaggattgccctgttggcagctactgtcatatcacactgaccgcggctaggtgctgc
ccgaaaaacgattcgagacaatctgaagaaaagaagatatctcattgttcggaaacgtcc
tacgggtgttgttcggacggttcgaccgcagctactgggcctaatgaggaggggtgccca
atcacgagttcgacttgcggttgtaatcggctcgggtcagtgtcggatcgatgcgatgag
gacggacagtgtgtttgtcgtcccggcgtcggcggactcaagtgcgaccgttgtgagccc
ggctattgggggctaccgaggatcggttccgggcatacaggctgcattccatgtggttgt
tccgcatttgggtcagttagagaagattgcgaacaaatgacaggccgatgtgtttgccga
actggggttcaaggacaaaagtgtaccgtgtgtgccgaccacaggcgcagattaggaccc
aacgggtgctctgaccctgaaacgggtggcgttgtatcttcatgcgctgaattgtcttgt
tacttcggtgctgtttgtactgagcgcacaggcggcgcgctgtgcgagtgcgcagccgca
ccttgttcagatagtgacaccaacatgttggtatgcggtagcgacgggaaaacttatgag
tctgagtgtcacctcaaattgcaagcgtgtcgcacgcaagaggatatcgtggtgcaagcg
tttgggccatgtaagttgggggaagtggctggcacggccgggccaccgcgaccttcgtca
cccatacagttcacacagcaggacgacggcgccgcttctaagtccaccaggcacctgctc
aacccagataaatactataataaatacgactggactagaaaagaaacacccagtgacttt
gacagcattctatctggacagaaattcaaagcgacaacagcaacagtaggttctgggtca
gtgggagctttattgggcgacttgtgcgcggacgacgcggactgcgcggcgctgccgggc
gcggagtgctcgcgcgcagcatgtgtttgtcgcgctggacacgtgccgaccatgcatcgg
aaagcgtgtgttgaacaagttcctcaggaaacaaccgaagagtatagtgcttgtttgtca
gagccatgttacaacctcggcacttgtattgatttgcctggatccacttacacgtgcttg
tgtgccggcccttacacaggattgaactgcgaatctctcgcaaaggacggacttttggga
agctacatagagactccatcgttcgacggcacgtcttatataaggctgaaacccttgaaa
gcttaccacaagttgaatatcgatatcgagtttaaagccttttccgagaacggcgtaata
ttgtacaatcagcaaaaacctgacggcaccggtgattttgtttcactcgctttagtcaac
ggatatttagagtttaggtataatcttggaaacggagtgttaatacttacttcactagaa
aagataactctaaacgagtaccacaaggtgtcggccaagcgataccatcgagacgggatt
ttatcagttgacgatatggaagatgtggtcggccagtccagtggccatttaaaagcatta
gatctgaacgaagacgcctacattggcagcgtacctacaaacttctctagagtcttcgat
aacatcggaacgcgcagcagctttatcggctgtgtcaaatcgttaaggataatacgtcat
caagtgacaaagaaattgggtcgtcccgactcattagtcgttgctatagaaaatgttcaa
gagtgccaatctagcccatgtatgagcatgccgtgcaaaaatggcgctacgtgtaaatca
gtagacgggtcgacaaccgaatatacttgtagctgccctatcggatttcaaggagccaat
tgtgacgagagattagatccgtgcgagtcgaatccctgcggatatgacgagggactattg
tgtgacatcggagccgacggcggacacgtctgtcgatgtttgtttggaggcgaaatcggc
tctaatggaaatacttgcaacaatgatgtaactgtagtacaagagacctggtcccctcag
ttcaatgggacgagctacgtagaattaccgccacttgaagggctgggaaaagcgttccgc
attgaaatttggtttttaacgaaccgattttccggaatgctcctttacacgggccagtct
aataaagccaagggggattttgtagcgattaacctggttaatggtcaccttcagtttagg
ttcaatttgggaagcggtattgctaatataacgtcgccagtgccaataacaaagggtcga
tggcatagggcacgggtatctcgatatgggcgtcatggaagtctccagttagaccatcac
cccacccagagaggcaactcagctcctccattaacgcatctggaactcacattacctctc
tttattggatcattgccctcatatattcgtccgcacaagatgtcaggcgtgaccagcagt
ttcataggttcagtgcaacaggtatttgttaatggcaatcctttgtctctgtatggggct
gacacggctaagtgttccatagtgcaagatgaggatcgcttgccttgtgccactactggt
gttactaaatatacgggacctccctgcggagaagaattgacaccctgcaagaacaatggc
tcctgcatacctctactcaatgaatacaagtgtatttgtcgagacggataccaaggcagg
aactgcgaggttcaaatcaacgtcgaaatgctcaacgaacgaaccccagtcaagttcgat
ggaaacaattacttctcgtacaggagtagaggcagtcgcaggaacagcggcgtccgcggc
attagatacgaaataaaattccgaacatttaacgattcgggtctcctaatgtggaggcga
aagatcggtattaggcctagagactttgtcggcttaggcctaagtgaggggaaactccag
cttatatatacagacactgatattaaagaaatgaacttggcgagtcacgaggactggttc
caatgtgtagagtcgaaggcgagggtggacgatggtcgttggcacacggcgactgtcagg
cgaaggaagaggttggcgatgctgcaagtggacgatacgccgcctgtcagagggtactcg
cagtctctattagtaccctcgaaatctaaccccaagttatggattgggggttcgccatcg
ctaccgctgggtttgccggccgctctgtacacggggctgcggggctgcgtcgccagtatt
aaggcaaacggacgacacatcgatctcagcgctcccatacgtccgacctccaccgtcaga
cactgcgactga
DBGET
integrated database retrieval system