Trichoplusia ni (cabbage looper): 113497643
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Entry
113497643 CDS
T05757
Name
(RefSeq) breast cancer type 1 susceptibility protein-like isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
tnl03460
Fanconi anemia pathway
tnl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113497643
09124 Replication and repair
03440 Homologous recombination
113497643
03460 Fanconi anemia pathway
113497643
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tnl01009
]
113497643
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113497643
03036 Chromosome and associated proteins [BR:
tnl03036
]
113497643
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113497643
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113497643
Protein phosphatases and associated proteins [BR:
tnl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113497643
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113497643
Multi subunit type E3
BRCC complex
113497643
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113497643
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113497643
BRCA1-A complex
113497643
BRCA1-B complex
113497643
BRCA1-C complex
113497643
BRCA complex
113497643
FA (Fanconi anemia) pathway
Downstream FA components
113497643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
RTT107_BRCT_5
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113497643
NCBI-ProteinID:
XP_026733048
UniProt:
A0A7E5VXI2
LinkDB
All DBs
Position
9:complement(6481663..6491273)
Genome browser
AA seq
1212 aa
AA seq
DB search
MNVKEFDLVKTLTSQQIDQVTCLECCKYYVAPATAACGHTLCLTCWRGRRTCPTCSHQFD
RKSLKLNVPLQSLKDHVQVLGEAFEKLTKTNIFSLQNTPDEMEIEQDPVKNVKDWLTSSQ
NHFSAPIQSSETFSQDLQQPSNPMEVSASNIIIHTESKKVDAPPKVIYVPPPQDDWDKIE
PIADTEEFPKKRSNIAGPMDIEPFYLEDTEYTTNNPRRSSRKREKNDDSTTKDLSSNVHS
SRDSSGDNDKKSQKTKQTWNSVKRMRKEFSKLNKKNRNKLNVSIEMVKKTQNLKPITSTP
VASQPVISIDDNTPQIKSTEDKAMDNKSEPAEQELININTNVLPAQKETVSENSVDVAKE
SQTILPSNDIIFETGKSKVNTQRIEHHDNKNQEDNDQPKQTKMAFIKKSALNPTKINNTN
IINHNYVKEPTTSENNDDIEISIKVGNTITNIVIKKKHNDVQVKVNTDQEVQTSLGPHNL
NQNNEISVKDPTTHNVDINIGSIGKKYKEPVVSVLTYQNLQPTDSNVEKSTSGKKNTASA
DTATAQFEITESVEKELSNIMECDEIQNKIEKPINLPSAIQQNIEEQNVNTKIQEQVENV
EDLNDLDIFNSGSVKEGNVHVLSAHAPSEILISTAQSRGRTQKTVEKRNRDDNDDILPKN
KKAKMTQNKSNLKEKETQLDSDSITYDALMGQVFANIDADIEDIRQTQEQETVVVLKEDT
REKQDQNTSRNTKKLSQIKKTQTLKTAQDNTNTQVTQKVNEYYNEKHSENVFSILEKEDE
VSQIAKTDKVAPQPEEFLTPVICRLDSSQESVGNKQNKKSQDYDDSDRSVVEETPQKNLS
FPKLKRASTSNLSQINLSDSKKASLRRSTSNAKSVINLTDTVTDTNKTSGEVTVIDTEVR
KVALETPLTITKFADQIKHKSTPMARKSLNFNNENDDDPEQTLCPTSEIAKTTQEREFMS
KAFERTPSTPAARPLKARNVGLNSNRMFCLAGSCLTSTELAQVKSLCYEQKWTYVEKYTK
NITHLIVGVDEEKKSQRSVKYMCALAASKWIVAFDWVKICLQKKEVVNEEFFEALDSTGE
PGPRRSRIAKKKLFEGISFYCMPPFSVLDLETLKNMLVAAGGRVVNEARAVKITPDNAHP
ALLLAEPEHTQEDRFIYLAMEQSIVPVNYEWVLNCLGNYTLGSIHELLLCPSSLLPAATA
RWPEVLLSQDYD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaagaatttgatttggtaaaaacgttaacatcacaacaaatcgaccaagta
acttgtttggaatgttgcaaatattatgtggcaccagcaactgccgcttgtggccacaca
ttatgtcttacttgttggcgaggacgtcgaacatgtccaacatgttcacaccaattcgac
cgcaaatcattgaagcttaatgtgccacttcaatctcttaaagatcatgtccaagtactc
ggagaggcatttgaaaaactcaccaaaacaaatatatttagccttcaaaacacacctgat
gaaatggaaatagaacaagatcctgttaaaaatgttaaagattggttaactagttctcaa
aatcatttttcagcacctatccagagttctgaaacattttcacaggatctacaacaacca
tccaatcctatggaggtgtcagccagtaatattattattcacactgaatctaagaaagtt
gatgcccctcctaaagttatttatgtcccaccacctcaagatgattgggacaaaatagag
cctattgctgacacagaagaatttcctaaaaaaagaagcaatattgcaggtcctatggat
atagaaccattttatttagaagacactgaatatacaacaaataatccacgccgaagttct
cgaaaaagagagaaaaatgatgattccactacaaaagacctttcttctaatgtccatagt
tctagagattccagtggtgacaatgataaaaagtcacaaaagactaaacaaacttggaat
agtgtaaaaaggatgagaaaggaatttagtaagttgaataaaaaaaatcgcaacaaactc
aatgtgtctattgagatggttaagaagacacagaacttgaagccaattacaagcacccca
gttgcttctcaacctgtaattagtatagatgataacactccacaaattaaaagcactgaa
gacaaagccatggataataaatcagaacctgcagagcaagaactaattaacatcaatacc
aatgtacttcctgcacaaaaggagactgtttctgaaaactctgtagatgtagcaaaggag
tctcagactattttaccttcaaatgacattatttttgaaacaggtaaaagtaaagtaaat
actcaaaggattgaacaccatgacaataaaaatcaagaagataatgatcaaccaaagcaa
acaaaaatggcttttatcaaaaaaagtgcactaaaccctaccaaaataaacaataccaat
attataaatcacaattatgtgaaagaaccaacaacttctgaaaataatgatgatatagaa
atttctattaaagtaggcaacacaatcactaatatagttataaagaagaagcacaatgat
gtccaggttaaagtgaacacagaccaggaagtacaaacatctttagggcctcataatttg
aatcaaaataatgaaatttcggtaaaagatccaactacacataatgtagacataaatatc
ggaagtataggcaaaaaatataaggaaccagtagttagtgtacttacatatcaaaatctg
caaccaacagattctaacgtagaaaaatcaacatcaggcaagaaaaatactgcatcagcg
gacacagcaacagcccaattcgaaataacagaaagtgttgaaaaagaactgtctaatata
atggagtgtgacgaaattcaaaacaaaatagaaaaacctattaacttacccagtgccata
caacaaaacattgaagaacaaaatgttaatacaaagattcaagagcaggttgaaaatgtt
gaagatttgaatgatctagatatatttaatagtggatcagtcaaggaaggcaatgttcat
gtgttaagtgcacacgcaccttccgaaatattaatttccactgctcaaagtagaggaaga
actcaaaaaactgttgaaaaacgtaacagggatgataatgatgacattttacctaaaaat
aagaaagcgaaaatgacccaaaacaagtctaatcttaaagaaaaagaaacacaactagac
agtgactctataacttatgatgctttaatgggtcaagtgtttgcaaatatagatgctgat
attgaagacatcagacaaacccaagagcaggaaacagttgttgtcttaaaagaggataca
agagaaaaacaagatcagaacacaagtagaaatactaaaaaactgtcgcaaattaaaaag
acacaaacattgaaaaccgcccaagataacactaacactcaagtaacacagaaagtaaat
gaatattataatgagaagcacagtgaaaatgttttttcgattttggaaaaggaagatgaa
gtctcacaaattgctaaaacagataaagtagcaccgcaacccgaagaattcttgacacca
gttatatgtcgactggattcgtcccaggaaagtgtgggcaacaaacaaaacaaaaagtcg
caggattatgatgattcagatcgaagtgttgttgaagaaactccacaaaaaaatttatca
ttccctaaactcaaacgagcaagtacatcaaatctatcgcaaataaatttaagcgatagc
aaaaaggcttctttacgaagatcaacatcaaatgcgaaaagcgttattaatttaacagat
acggttacagataccaataaaactagtggagaagtaacggtcattgatactgaagttcgg
aaagtagctttggaaactccccttactataacgaagtttgctgatcaaataaaacacaaa
tctacgccgatggcgagaaagtcccttaattttaataatgaaaatgatgatgacccagaa
cagactttatgtcctacctcagaaatagcgaaaacaacgcaagagagggagtttatgagt
aaagcatttgagagaacgccttctacgccagccgcgagacctttaaaagctaggaacgta
gggttaaattcgaacagaatgttttgcttggctggctcctgcttaacatccactgaacta
gcacaagtaaagagtctttgttatgaacagaaatggacgtatgtcgagaaatatacgaaa
aatattacgcatttaattgtaggtgttgatgaagagaaaaagtcgcaaagatccgttaag
tacatgtgtgcattagcagcttctaaatggattgtcgcttttgattgggtgaagatatgt
ttacagaaaaaggaagtcgtcaatgaggaattcttcgaagccttagacagtacaggtgaa
ccaggaccgagacgctctcgcatcgcgaagaagaagcttttcgaaggcatctcattttac
tgcatgcctccgtttagtgtacttgatcttgaaacactcaagaacatgttagtagctgct
ggcgggcgagtggtcaatgaggcgagggctgtcaaaataacgccagacaatgcccaccct
gctctgttactggctgaacccgaacacacgcaggaagatcgctttatatacctcgctatg
gaacagagtatagtgccagttaactacgaatgggtcttaaactgtctaggaaattacact
ttaggatccatacatgaacttctactatgtccttcgtcgctattaccagcagccactgcc
agatggcctgaggttttactcagccaagattatgattaa
DBGET
integrated database retrieval system
