Trichoplusia ni (cabbage looper): 113509008
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Entry
113509008 CDS
T05757
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl00310
Lysine degradation
tnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113509008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113509008
03036 Chromosome and associated proteins [BR:
tnl03036
]
113509008
Enzymes [BR:
tnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
113509008
Transcription factors [BR:
tnl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113509008
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113509008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-H2C2_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
113509008
NCBI-ProteinID:
XP_026748044
UniProt:
A0A7E5X5K8
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All DBs
Position
3:4967605..4971904
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AA seq
292 aa
AA seq
DB search
MYCWQIYDRNNKPMHVIDAADSGRSNWLRYVNCARHWREQNLLAYQYQGELYYRTIKTIP
RFTELLVFYGSEFANVLNININKYNCDKYYRDLQLSSTPFTIQPHRNNPNNLPKAIICSE
KENIVFDSIENKNNKENINIEETIYDIENVDNPYNINIKGDTIKIEFKRNKEIKYTCEIC
QKTFNTKSILNRHIKIHAKNRGENQLSYQKCDRSTNNIDNFQKNCQKRERRSFYTTPKKC
EQCHFETLSRKVLQTHRSKHKGNIYKCHHCEYSNHCKFNLSRHIYNKHRNLF
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttggcagatatacgatcgcaacaacaagcctatgcacgtgatagacgcggcg
gacagcggccgctccaactggctgcgctacgtcaactgcgcgcgacactggcgcgagcag
aacctgctggcctaccagtaccagggggaactgtactaccggaccataaaaacaattcct
agattcacggagctcttggtgttctatgggagcgagttcgcgaatgttctaaacatcaat
ataaacaaatacaactgcgataagtactacagagatctacaactatctagtacaccattc
acaatacaacctcataggaataatccaaacaaccttccaaaagcaattatttgttctgaa
aaggaaaatatcgtatttgattccattgaaaacaaaaataataaagaaaacattaatatt
gaagaaacaatttatgacatcgaaaatgttgacaacccatataacattaatataaaaggc
gatactatcaaaatagaatttaaacgaaacaaagaaataaaatacacttgtgaaatctgt
caaaaaactttcaatactaaaagcattttaaatcgccatattaaaattcatgcaaaaaat
cgtggagaaaatcaactttcatatcaaaaatgtgataggtctactaataatatagataac
tttcagaaaaattgccaaaagcgtgaaagaagaagtttttatacaacgccaaaaaaatgt
gaacaatgtcactttgagactctatctcgtaaggttctccagactcatagatctaaacac
aaaggaaatatttataaatgtcatcattgcgaatacagtaaccactgtaaatttaatctg
tcaaggcatatttataataaacatagaaatttgttctaa
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