Thermosediminibacter oceani: Toce_0645
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Entry
Toce_0645 CDS
T01289
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00550
Peptidoglycan biosynthesis
toc01100
Metabolic pathways
toc01502
Vancomycin resistance
toc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Toce_0645
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Toce_0645
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Toce_0645
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
toc01002
]
Toce_0645
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_0645
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
toc01504
]
Toce_0645
Enzymes [BR:
toc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Toce_0645
Peptidases and inhibitors [BR:
toc01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Toce_0645
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Toce_0645
Antimicrobial resistance genes [BR:
toc01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Toce_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VanY
Cu_amine_oxidN1
Type_ISP_C
Motif
Other DBs
NCBI-ProteinID:
ADL07417
UniProt:
D9S1Z0
LinkDB
All DBs
Position
complement(645334..646677)
Genome browser
AA seq
447 aa
AA seq
DB search
MLVDRFHGQNWFFEAEVLSSIGGKKVKKKILILLIVVFVLSISSFTFAVSSLHLGSSGVS
IELDPASKADSNNRLVPIRFISDMVGGSLQWNSATDTSILTGKGFKLQAKNGANYVLINN
TPVHAGAVRIKNGQMYVSLAVLNYVPSEYISVDSATGRITIGRKQNWGTERSLNAAKATF
KYINKGNLILVNQSYPAGKGYSPTSLSKLDGKVPGNKSDLKLTAEAANQLVQMFKAAKKE
GVPGLIVTSAYRPYSYQSTLFNNKVNTYRKLGKTMSDAKRLAGRVVAVPGTSEHQTGLAV
DIFSRTLLQRTKGLEEVFDQTREGKWLIKNSYKYGFILRYPKDKQNITKIIYEPWHYRYV
GKPHAEIITKKKMCLEEYIEYLKKNRRIEYTSETGETFRIYYLGNAGWLSDIDVFTTNGL
AVDASSDNTGGLIVTVKIDKKPIMAKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttagtggacaggtttcacggtcagaactggttttttgaagccgaagttctaagcagt
attgggggtaaaaaagtgaaaaaaaagattttgattttacttattgtagtattcgtactg
tccatctccagctttacgttcgcagtaagttcacttcatttgggatctagcggggtcagc
atagaactggatccggcctccaaagccgatagcaataaccgtttagtccccatccggttt
atttccgatatggtggggggcagtctgcaatggaatagcgctaccgacaccagtatatta
accggcaaaggatttaaattgcaggccaaaaatggtgcaaattatgtcttgataaacaac
acccccgtacatgcaggcgctgtgcggataaagaacggccaaatgtatgtatccctagca
gttttaaactacgtgcccagcgagtatatttccgttgattccgctaccggcaggataact
ataggaagaaaacagaattgggggacagagcgttcgctcaatgctgctaaagccacattt
aagtacataaataaaggcaatttaatactggtaaatcaatcttatcccgcgggaaagggc
tactcacctacatctctgagcaagctggacggtaaagtaccagggaacaagtccgatctg
aaattaaccgctgaagcagcaaaccagctggttcaaatgtttaaagctgctaaaaaagaa
ggcgttccaggactaatagtaacgagcgcttaccgtccttacagctatcaaagcaccctg
ttcaataataaggtaaatacatacagaaaactgggtaaaacaatgagcgatgcaaaacgt
ctggcgggaagagtggtagcggtacccggtaccagtgaacatcagacaggccttgcggta
gacattttttcaagaacattgctgcagcgtaccaaagggcttgaagaagtgtttgaccaa
actagagagggtaaatggttaattaaaaattcttacaagtacgggtttattttgcgctat
ccaaaagataagcagaatatcaccaagataatttacgaaccctggcactaccgttatgta
ggtaaaccccatgcggaaatcataacaaaaaagaagatgtgcttggaggagtatatagaa
tacctcaagaagaaccggcggatagaatacacttccgaaaccggtgaaactttccggatc
tattacctggggaacgccggttggctatcggatattgatgtttttacaaccaatggacta
gctgtcgatgcgtcttcggataataccggcggccttattgtaaccgtaaagattgataaa
aagcctataatggcaaaaaaataa
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