Thermosediminibacter oceani: Toce_0947
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Entry
Toce_0947 CDS
T01289
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00300
Lysine biosynthesis
toc00550
Peptidoglycan biosynthesis
toc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Toce_0947
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Toce_0947
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_0947
Enzymes [BR:
toc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Toce_0947
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Precursor biosynthesis
Amino acid ligase
Toce_0947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Scaffolding_pro
Motif
Other DBs
NCBI-ProteinID:
ADL07709
UniProt:
D9S2T2
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All DBs
Position
938337..939794
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AA seq
485 aa
AA seq
DB search
MKVDQLLKNLSEIVDVKGSTEVEISSIAYDSRKVKKGGLFVAIKGFKLDGHDFIGQAINN
GAVVVIGEKEINLPEDVLYIKVKNSRKALSEASSLFFGKPAERLNVIGVTGTNGKTTTTY
LIKAILDEAGYSTGVVGTIGIRIKERLLPAERTTPESLELNEIFSEMVKEGVEYVTMEVS
SHSLKLHRVDHVKFEVGVFTNLTQDHLDFHVSFEDYYASKKKLFDLSRKAVINVDDESGE
RLCSELNIPVITYAIEKNADVRAENVVIGSDGVSYEVCAGGERRKITYKVPGRFSVYNSL
AAISACLSLGIDLETMAKALEKVRGVPGRFEPVDEGQDFTVIVDYAHTPDGLENVLNTVK
TFARGRIITVFGAGGDRDRGKRPLMGKVVSERSDYFIITSDNPRTEDPQAIIDDIEKGVT
ERSNYEKIIDRREAIRRAIEMALPGDVVLIAGKGHEDYQIIGDKVLHFDDREVAREFLRQ
KGRKR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagatcagttgttgaaaaacctcagcgaaattgtagatgtgaaaggttcgacg
gaagtcgagatcagcagcatcgcttatgattctcgtaaggtgaaaaaaggaggccttttc
gtggcaattaaaggttttaaacttgacggtcacgattttataggccaggcgattaacaac
ggagccgttgtggttataggggaaaaagaaatcaatttgcctgaagacgtgctttacata
aaagtcaaaaacagccgaaaagccctttccgaggcatcgtcgttgtttttcggaaaacct
gccgagaggttgaatgtgatcggtgttaccgggaccaacggcaagaccactacaacgtat
ctgatcaaagccatcctcgacgaggcgggatattccaccggagttgtaggtactataggc
ataaggatcaaggaaaggcttttaccggccgaacgcaccacgcccgaatctctggaattg
aacgaaattttttcagaaatggtaaaagagggagtggaatacgtaactatggaagtttca
tcccactccctaaagctgcacagggttgatcacgtaaaatttgaagtgggggttttcacc
aacctaactcaggatcacctggatttccatgtgagctttgaagattactacgcctccaaa
aagaaacttttcgatctttcgcgaaaagccgtgatcaacgtggacgacgagagcggcgag
cgcctttgtagtgaattgaatatcccagtaataacctatgctatcgaaaaaaacgccgat
gtgagggctgaaaacgtcgttatcggttcggacggagtttcttacgaagtatgtgccggt
ggtgaaagaaggaaaatcacatacaaagtaccgggtcgattcagcgtttacaattccctg
gccgcaatttccgcttgtctttctctggggattgacctggaaaccatggcaaaagctctg
gaaaaggtaagaggtgttcccggaaggtttgaaccagtagatgaaggtcaggattttaca
gttatcgtcgactacgcccatactcccgacggactggaaaatgtgttgaatacggttaag
acttttgccaggggtaggataattacggtttttggagcgggaggagaccgggatcggggg
aaaaggcctctgatgggaaaagtggtttccgaacgctcggattactttataattacctcc
gacaatccaaggaccgaagacccgcaggctattatagatgacatagagaaaggggtaacc
gaaaggagtaattacgaaaagataatcgatagaagggaagctatcagaagagctattgag
atggctttacccggtgatgtggttctgattgctgggaaaggccatgaagattatcagata
attggggataaggtcttacacttcgatgacagagaggtagccagagaatttttaagacag
aaggggagaaaacggtga
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