Thermosediminibacter oceani: Toce_2169
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Entry
Toce_2169 CDS
T01289
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
toc
Thermosediminibacter oceani
Pathway
toc01501
beta-Lactam resistance
toc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Toce_2169
01503 Cationic antimicrobial peptide (CAMP) resistance
Toce_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
toc03036
]
Toce_2169
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
toc02000
]
Toce_2169
01504 Antimicrobial resistance genes [BR:
toc01504
]
Toce_2169
Chromosome and associated proteins [BR:
toc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Toce_2169
Transporters [BR:
toc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Toce_2169
Antimicrobial resistance genes [BR:
toc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Toce_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Prefoldin_2
DUF4407
OEP
PTS_EIIA_1
EMP24_GP25L
Phage_GP20
End3
LPAM_2
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
ADL08882
UniProt:
D9S0M4
LinkDB
All DBs
Position
complement(2170756..2172000)
Genome browser
AA seq
414 aa
AA seq
DB search
MLRKGFAALIFFLIPVMVVAGCGRKPPEAADTQESVPVKVDRVTARDLAEYRIFPGTVEA
AGQVTVTAKMSGRVEAVLVKAGEKVKAGQVLVRLEQQDVKSQVDQAKAGYEAALANYNKI
NSQLEQEVQRLESALKQAEENYKNTAQNYERMSGLYQDGAISKREFEGIELQYKIAKEQY
ESARVQLEMTKEKAVPGTVAAAKAQVEQAKAALSAAQSALESTLITAPIDGVVGAVDVKV
GQLITPGIPVATLGNTGSMVVKINVSEDVINSVKTGQKVEVAIEAAGVNLEGTVTSVSPY
KDARTGTYPVEVNISGAGETVKPGMFARVKLAVATYPKVLAVPEECVLTKGEDKIIYLVE
GGKAKAVKVVTGPTVDGFTVIREGLEEGLEIVVEGQEYLDDGAPVEVVGKEEGK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaaagggttcgcggcattgatattttttcttattcccgtaatggtcgtagcg
ggctgcggaaggaagccgccggaggccgccgatacacaggagtccgttcccgtaaaggtg
gaccgggtaactgcgcgggatttggcagaataccgtatctttcccgggacggtagaggct
gcaggccaggtgaccgttaccgccaagatgtcgggcagggtggaagcggttctggtgaag
gccggcgaaaaagtaaaggccggccaggtgctggtaaggctcgaacagcaggacgtaaaa
tcccaggttgaccaggccaaggcggggtacgaagcagcccttgccaactacaataaaata
aacagccagctggaacaggaggtccaaaggctggagtcggcgttgaaacaggccgaggaa
aactacaaaaacaccgctcagaattatgagaggatgagcggactctatcaggacggggcc
atttccaagcgtgaattcgaagggatagaactgcagtacaaaatagcgaaggagcagtac
gagtctgccagggtgcagcttgagatgacaaaagaaaaggcggtgccggggacagtggcg
gcggcaaaagcccaggtggagcaggctaaggctgcgctttccgccgcacagagtgctctg
gaaagtacgctgataacagcgcccatcgacggcgtagtaggagccgtagacgtgaaggtg
gggcagctcattactcccggcataccagtggccaccttgggtaacaccggcagcatggtc
gttaagataaacgtgagcgaagatgttataaattctgtaaaaaccggacagaaggtcgaa
gttgccatcgaagccgccggggtgaacctggaaggcacggtgacaagcgtgagcccttac
aaggatgcgaggaccggtacctaccccgttgaggtgaatatatccggtgccggcgagacc
gtaaaacccggcatgttcgccagggtgaagctggccgtcgccacatatcccaaagtatta
gccgttcccgaggaatgcgtgctcacgaaaggcgaggataaaattatctacctggtggaa
ggcgggaaggcaaaagcggtgaaggtcgtaaccgggcctacggttgacgggtttacggtg
atcagggaaggattggaggaaggccttgagattgtggtagagggccaggaatatctggac
gacggggccccggtggaagtggtcggtaaggaggaaggaaaatga
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