Talpa occidentalis (Iberian mole): 119232859
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Entry
119232859 CDS
T07495
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119232859 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tod03041
]
119232859 (EFTUD2)
Spliceosome [BR:
tod03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119232859 (EFTUD2)
Complex C
U5 SnRNP specific factors
119232859 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
119232859
NCBI-ProteinID:
XP_037351087
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattgggccagaactggattctgat
gaagatgatgatgaattgggcagagagactaaagatcttgatgagatggatgatgacgac
gacgacgatgacgtaggagatcacgatgaagatcaccctgggatggaggtggtactgcac
gaggacaagaagtactaccccaccgctgaggaggtgtatggtcctgaggtggagaccata
gttcaagaggaagacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacagtgtatgaaatggatttcttggca
gatctgatggataattccgagctcatcagaaatgtgaccctttgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatagagcagactcacccagaaatcagaaagcgt
tatgaccaagatctgtgctacacagacatcctcttcacggagcaagagagaggtgttggt
atcaaaagcacccctgtgacagtggtcctgccagacaccaaagggaaatcttacctcttc
aatatcatggacacaccaggacacgttaacttttctgatgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggttgatcaagcacgcagtgcaggagaggctggcggtcaccgtgtgtatcaacaagatt
gaccggctcatcctggagctgaagctgcctcccacagatgcatattacaagctgcgccac
attgtagatgaagtcaacggattgataagcatgtattccactgatgagaacctgatcctc
tctcctctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctccttcgccaagatctatgctgacacctttggtgacattaactaccaggaatttgct
aaaagactatggggtgacatctacttcaaccccaagacgcgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagctttgtggaatttatcttggagcctctttataagatc
cttgctcaggttgtgggtgatgtggacaccagcctcccaaggaccctggacgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctcgtgtgc
aaaaagttcttcggcgagtttacaggctttgtggacatgtgtgtgcagcacatcccctct
ccaaaggtgggtgccaagcccaagatcgagcatacctatactggcggtgtggactccgac
ctcggcgaggccatgagtgactgcgaccctgatggccccctgatgtgccacaccaccaag
atgtacagcacagacgatggagttcaatttcatgcttttggccgggtgctcagtggcacc
atccatgctgggcagcctgtaaaagtgctgggggagaactacaccttggaggatgaggag
gactcccagatatgcaccgtgggccgcctttggatctccgtggccaggtaccacattgaa
gtgaatcgtgttcctgctggtaactgggtcctgatcgaaggcgttgatcagccaattgtg
aagacagcaaccataacagaaccccgaggcaatgaagaggctcagattttccggcccttg
aagttcaacaccacatctgtgatcaagatcgcagtggagccagtcaacccctcagagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctacccgtccctcaccaccaag
gtggaagagtctggcgagcacgtgattctgggtactggggagctctacctggactgtgtg
atgcatgatttgcggaagatgtactcggagatagacatcaaggtggctgatcctgttgtc
acattttgtgagacagtggtggagacatcctccctcaaatgcttcgctgaaacacccaat
aagaagaacaagatcactatgattgctgagcctcttgagaagggcctcgcagaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtatgattgggatctgctggctgcccgttccatctgggcttttggccctgatgccact
ggccccaacatcctggtggatgataccctcccctctgaggtggacaaggccctccttggc
tcagtgaaggacagcattgttcaaggtttccagtggggcaccagagaggggcctctctgt
gatgaattgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaggaaccc
ctgcaccggggcggaggccagatcatccccacagccaggagagtggtctattcagccttc
ctcatggctactcctcgtttgatggagccttactactttgtagaggtgcaggcccctgct
gattgcgtctctgctgtttatactgtcctggccagacgcagggggcacgtgactcaggat
gcaccaattccaggctcccctctctacaccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctgcggactcacactcaggggcaggccttttccctgtctgtc
ttccaccattggcagattgtgcctggtgaccctctggacaagagcattgtcatccgcccc
ctcgagccacagccagctccccacctggcccgggaattcatgatcaaaacccgtcgtagg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgacgatcctatgttgctggag
cttgccaagcaggacgtcgtgctcaattaccccatgtga
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integrated database retrieval system
