KEGG   Talpa occidentalis (Iberian mole): 119247255
Entry
119247255         CDS       T07495                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
tod  Talpa occidentalis (Iberian mole)
Pathway
tod03250  Viral life cycle - HIV-1
tod05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:tod00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119247255
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    119247255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tod03019]
    119247255
Messenger RNA biogenesis [BR:tod03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119247255
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC_C APOBEC3 APOBEC4_like APOBEC4 APOBEC1 Toxin-deaminase OTT_1508_deam
Other DBs
NCBI-GeneID: 119247255
NCBI-ProteinID: XP_037369443
LinkDB
Position
Unknown
AA seq 388 aa
MSSIRVPEGYDIYQRPFHFHFKNLLRAYGRNRTFICYEVERQDGGSFVSVASGVFTNQFC
HRHAELLLLSWLRQLLSPREHYHVTWFMSWSPCAGCARAVADFLQEHRTTVQLSVFAARL
YYHWDPKFREGLRRLSHLGAQVDIMSFQHFRYCWDNFVDNQGTPFRPWKELQRNYRSLVT
ILKDILRVPEGYYIYRPTFYFHFKNLLRAYGRNRTFICYEVKKSFRGYFFHVASGVFTNQ
FEPGPQIHPELLLLSWLEQLLSPREHYHVTWFMSWSPCAGCARAVADFLQKHHTVQLSVF
AARLYYHWEPEYREGLRRLGAQVDIMSFEDFRYCWDNFVDNQGTPFRPWKELQRNYRSLV
TILKDILRPVFTTSNGYNLELGHRAAQC
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgtccagtatcagagtcccagaaggctacgacatatatcaacgacctttccacttccac
tttaaaaacctactccgagcctatggtcgaaaccgtaccttcatctgctacgaggtggag
agacaggatggcggctcatttgtgtccgtggccagcggggtctttacaaaccagttttgc
caccgccacgcagaactgctcctcctctcctggctgaggcagctcctgtccccccgggag
cattaccacgtcacctggttcatgtcctggagcccctgcgcaggctgcgcgcgggcggtg
gccgacttcctgcaggagcaccgcaccaccgtgcagctgagcgtcttcgccgcccgcctc
tactaccactgggaccccaagtttcgggaggggctccgccgcctgagccacctgggggcc
caggtggacatcatgtccttccagcacttcagatactgctgggacaactttgtagacaat
cagggaacgccttttaggccttggaaggaactgcaacgaaattatcgttccctggtcaca
atactcaaagatattctcagagtcccagaaggctactacatatatagaccaactttctac
ttccactttaaaaacctactccgagcctatggtcgaaaccgtaccttcatctgctacgag
gtgaaaaaaagttttcgtggctattttttccacgtggccagcggggtctttacaaaccag
tttgaacccgggcctcaaatccacccagaactgctcctcctctcctggctggagcagctc
ctgtccccccgggagcattaccacgtcacctggttcatgtcctggagcccctgcgcaggc
tgcgcgcgggcggtggccgacttcctgcagaagcaccacactgtgcagctgagcgtcttc
gctgcccgcctctactaccactgggagcccgagtaccgggaggggctccgccgcctgggg
gcccaggtggacatcatgtccttcgaggacttcagatactgctgggacaactttgtagac
aatcagggaacgccttttaggccttggaaggaactgcaacgaaattatcgttccctggtc
acaatactcaaagatattctcaggcccgtatttacaaccagtaatggctacaacctggag
ctgggccacagagctgctcagtgctaa

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