Thermoleptolyngbya oregonensis: HNI00_15360
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Entry
HNI00_15360 CDS
T09452
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog01501
beta-Lactam resistance
tog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNI00_15360
01503 Cationic antimicrobial peptide (CAMP) resistance
HNI00_15360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tog02000
]
HNI00_15360
01504 Antimicrobial resistance genes [BR:
tog01504
]
HNI00_15360
Transporters [BR:
tog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HNI00_15360
Antimicrobial resistance genes [BR:
tog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HNI00_15360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
WOB44368
UniProt:
A0AA97BQM9
LinkDB
All DBs
Position
complement(3613682..3616855)
Genome browser
AA seq
1057 aa
AA seq
DB search
MFANFFIKRPVFTLVCAIITVFLGLVVLPTLPIAQFPDITPTQVVVTANYPGADAETVES
AVTNILEREINGVDGLRYMSSSSGSDGTSQITVTFTAGQDPDIAAVNVQNRVARAEPRLP
ELVTRTGITVEQSSSNFLMAIALYPTNGEYDSLFLSNYADLYMVEALRRIPGVGSIQIFG
ERKFAMRLWLDPARLAARGLTVQDVTSAIREQNLQVGAGQLGQQPADPNQEYQINLRADS
QLKSVEEFENLVLKTGEGGNLVRLKDVGRAELGAENYGTFLTYNDIESIGLGITQRSGSN
ALETTAAVRKELENLKRSFPPGIDYAVAFDITSFVQVSLRDVVYTLITAILLVVLVLFIF
LQDWRTTLVPAIAIPVALIGTFVFTKIFGFSINTLTLFGLTLATGVVVDDAIVVVEAIAA
KVQDRGMNPFRAAAETMKELSGAVIATSLVLMAVFVPVAFFPGTTGAIYRQFALTIAFAI
VVSTFNALTFSPAMSALLLRPRSDHQGWLGRQFERFNGFLDNVRQRYQRSLTVLSQLKYW
VLAGFVLALMATAWVYRTVPGAFLPEEDQGYFITLVQAPEGVSLNYTKKILDEASAEVRK
IPEVESNFAVTGFSFAGVAPNQGIMFTLLKPWEERKGRGQSVQEIIGQIQMKFFGMPKAR
IFSLNPPSIQGLGNFGGFQLEMQDRRGNMPLNEFVGYLYALMGAANQNPNLQAVFSTYSA
STPQMVVEVNRDRAKALGIDLNDIFSTLQSFLGSDYVNDFTLDRRSYRVYVQADQQFRAQ
PEDVNQLYVRSAAGQMIPLGNLVTLTPTTSAQSITHYNLFRSISVQGGAAPGRSSGQAIA
AMEQVAQQVFPPSLGFEWTGSALEEIESGGQAPLLFALGLLMVYLVLSAQYGSFVDPAII
LFAVPLAVLGALGAQFLRGQANDVYSQVGLVMLIGLASKNSILIVEYANQLREKGLPITK
AAIEAAQERLRPILMTGFSSLVGFFPLMIATGAGAASRRSIGTAIFGGYLLSTFLSLFMV
PVLYIIVKKLTDRFMPELPTPPADFEDLEEPLSATQK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaactttttcatcaaacgacccgtttttacgctagtttgcgccattatcacg
gtgtttttggggttggtggtactgcccacgctgccgatcgcccagtttcctgacatcacg
ccgacgcaggtggtggtgacggcaaactatccgggtgcagatgcagaaacggtagaaagc
gccgtgacgaatattttggagcgggaaatcaatggcgtagacgggctgcgctacatgagt
tctagcagcggcagcgatggcaccagccagatcaccgtcacctttacagcagggcaagat
ccggacattgcggcggtgaacgtgcagaaccgagtggcccgggccgagcctcgtttgcca
gaactggtaacccgaacggggattacggtagagcagtcgtccagcaacttcctgatggcg
atcgccctctaccccaccaacggcgaatacgatagcctcttccttagcaactacgccgac
ctgtacatggtggaagcgttgcggcggattccgggggtcgggtcgatccagattttcgga
gaacggaagtttgccatgcgcctctggctcgacccggcgcggctggcagcacgggggctg
acggtgcaggatgtcaccagcgccattcgcgaacaaaacctccaggtgggcgcggggcaa
ctggggcaacagcctgctgatccgaatcaggaatatcaaattaacctgcgagccgatagc
cagctcaagtccgtcgaagaatttgaaaacctggtgctgaagacgggagaaggcggcaac
ttggtgcgcctgaaagatgtgggccgggcggaactaggcgcagagaattacggaacgttt
ttgacctacaacgatattgaatctatcggcttgggcattacgcagcgttccggttccaat
gcgctggagacaacggccgccgttcgcaaagagctagaaaacctaaagcgctcctttccg
cctggcattgactacgccgtggcgtttgacattaccagctttgtgcaggtttcgctgcga
gatgtggtgtatacgctgatcactgccatcctgctggtggtgctggtgctgtttattttc
ctgcaagattggcgaactacgctggttccggcgatcgccattccggttgcgctgattggg
actttcgtgttcaccaagatattcggcttctcgatcaacacgctgaccttgtttggtctg
acgctggcgacgggtgtggtggtggacgacgcgattgtggtggtggaggcgatcgccgcc
aaggtgcaagatcgcggcatgaatccgttccgcgcagcggccgaaaccatgaaagaactg
tctggcgcggtgattgcaacttcgctggtgctgatggcggtgttcgttccggtggcgttt
tttcccggcacgacgggcgcaatctatcgccagttcgcgctgacgattgcctttgccatc
gtcgtgtctaccttcaatgcgctgaccttttcgcctgcgatgtcggcgctgctgctgcgg
ccccgttccgaccaccagggctggctggggcgacagtttgagcgcttcaacggatttttg
gacaatgtgcggcagcgctatcagcgatcgctcacggtgttgtctcagttgaagtattgg
gtgctggctgggtttgtgctggcgctgatggccacggcttgggtttatcgcacggttccc
ggagcctttttgccggaagaagaccagggctatttcattacgctggtgcaggctcccgaa
ggcgtgtcccttaactacaccaagaaaattctggatgaagcctccgccgaggtacgcaaa
attccggaggtagagtcgaattttgccgtaacgggctttagctttgcgggcgttgcgccc
aaccagggcattatgttcacgctgctgaagccgtgggaagagcggaagggtcgggggcag
tctgtccaagaaatcatcgggcaaatccagatgaagttttttggaatgcctaaagcccga
attttctcgctgaatccgccctcgattcagggcttaggcaacttcggcggcttccagcta
gaaatgcaggatcgccggggaaatatgcccctgaacgagtttgtgggctatctctacgcg
ctgatgggagccgccaaccaaaaccccaatttgcaggcggtgttttctacctattccgcc
agcacgccgcagatggtggtggaggtaaaccgcgatcgcgctaaggccttgggcatcgac
ctgaatgacattttctcgacgctccagagttttctggggtcggattatgtcaacgacttc
acgctggatcggcgcagctaccgcgtttatgtgcaggccgaccagcagtttcgcgcccag
ccggaagatgtgaaccaactctacgtccgttctgccgctggtcagatgattcccctcggc
aatttggtaacgctgaccccaaccaccagcgcccagtcaattacgcactacaacctgttt
cgatcgatttcggtgcagggcggtgcggcgccaggaagaagctctggccaggcgatcgcc
gcgatggagcaggtcgcccagcaggtgtttccccccagcctggggtttgagtggactggc
agcgctctggaggagatcgagtcgggcgggcaggcgccgctgctgtttgccctggggctg
ctgatggtgtatctggtgctgtcggcgcagtacggcagctttgtagacccggcgattatt
ctgtttgctgtgccgctggcggtgctgggggcgctaggagcgcagttcctacggggacag
gccaacgacgtgtattcccaggtgggtctggtgatgctaattggtctggcaagtaaaaac
tcgattctgattgtggaatacgccaaccagttgcgcgagaaaggcttgcccattaccaaa
gcggccatcgaggcggcgcaggaacggttgcgacccattttgatgacgggcttctccagc
ttggtgggctttttcccgctgatgattgccaccggagccggggccgccagccgccgttcg
attgggacggctatttttggcggctatctgctgtctacgttcctcagcctgttcatggtt
cccgtgctgtatattatcgtgaaaaagctgacggatcgcttcatgcccgaattgcccacg
ccgcctgccgattttgaagatttggaggaaccgctgtcggcaacgcagaaataa
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