Thermoleptolyngbya oregonensis: HNI00_21615
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Entry
HNI00_21615 CDS
T09452
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog01501
beta-Lactam resistance
tog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNI00_21615
01503 Cationic antimicrobial peptide (CAMP) resistance
HNI00_21615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tog03036
]
HNI00_21615
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tog02000
]
HNI00_21615
01504 Antimicrobial resistance genes [BR:
tog01504
]
HNI00_21615
Chromosome and associated proteins [BR:
tog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HNI00_21615
Transporters [BR:
tog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HNI00_21615
Antimicrobial resistance genes [BR:
tog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HNI00_21615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_RND
YknX_C
CzcB_C
BSH_CzcB
Beta-barrel_AprE
RND-MFP_C
HH_EMRA
HH_AprE
MazE_antitoxin
YpzI
Motif
Other DBs
NCBI-ProteinID:
WOB45439
UniProt:
A0AA96Y9K2
LinkDB
All DBs
Position
5195128..5196495
Genome browser
AA seq
455 aa
AA seq
DB search
MLRSLSSLWNRQPVEGGRPPRGSNLALFLACSLVGLVAIAGCRIPSETAQAQQAQPGQAG
GPGGGRPGGGPGGPGQGGPASVETAIARSGALQEAPTYTGTTQPVRQASLRSQAEGRLLE
LGVDVGDSVREGEVVGRLDSRLLSAAVSQDRAELAALESQVAQAQAEVSDARAQAAQSEV
ELQQARMDSDRLQKLAAEGAISQQQADQAKTAALSAEQVFRSAQERIRTREQAVVAAQRR
VQAQQATVAETRERQTFSLLTAPLTGIVLERLTEPGNLVQPGNEVLRVGDFSALKVAVQV
SELDLGQLRVGQAVEVRLDAFPDEPFAGRVSRISPAADPASRLVPVEVVIPNSGSRRLGS
GLLARVQFQVGQAGRVVIPEEALEAGGEGNDSVLFVVEGDGAEARAVARPVQVGDRANGR
IEILSGLQLGESFVLRSSRPLEDGQPVRLSILSEG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctctctctcgtctctctggaatcgtcagcctgtggagggcggtcgtccgcct
cgcggttcaaaccttgccctgtttctcgcctgttctctggtggggctagtggcgatcgcc
ggatgccgcattccctcggaaacggcgcaggcgcagcaggcccagccagggcaggcaggc
ggccccggcggcgggcgaccgggcggcgggccgggtgggccagggcaaggcggcccggct
tcggtggaaacggcgatcgcccgctctggggccttgcaagaagcgcccacctacacaggc
acaacgcaacccgtgcggcaggcatcgctgcgatcgcaggcagaggggcggctcctggag
ttgggcgtagatgtgggcgactcggtgcgagagggcgaagtagtgggacggttggatagt
cggctgctgtctgccgccgtcagccaagatcgggcagaactggccgctctggaatcgcag
gtggcccaggctcaggcagaagtgagcgatgcccgcgcccaggcggcccagtccgaagtc
gagcttcagcaggcccggatggacagcgatcgcctgcaaaagctggccgctgagggagcc
atttcccagcagcaggcagaccaggcaaaaaccgctgctctttcagcggaacaggtgttt
cgctctgcccaagagcgcatccgcactcgcgaacaggcggtcgtggcagcccagcgccgc
gtccaggcgcagcaggccaccgtcgccgaaacccgcgaacgccagaccttcagcctgctg
accgcgcccctcacgggcatcgtcttggagcggctaacggagccgggcaacctggtgcaa
ccgggcaacgaagtgctgagggttggcgacttcagcgccctcaaggtggccgtgcaggta
tcggagcttgacctagggcaactccgggtcggccaggctgttgaagtccgactggatgcc
tttcccgatgaaccctttgcaggccgcgtcagccgcatttctcccgccgccgaccctgcc
tctcgtctggtgcccgtggaggtggtgattcccaactccggcagccgccgactgggaagc
ggactgctggcacgagtgcagtttcaggtagggcaagccggccgcgtggtgattcccgaa
gaggcgctggaagcaggcggcgagggcaacgactcggtgctgtttgtggtggaaggcgat
ggtgcagaagccagagccgtcgctcgccccgtgcaggtgggcgatcgcgctaacggtcgc
atcgaaatcctctccggcctccagctcggtgaatcctttgtcctccgcagcagccgcccc
ctagaagacggacagcccgtgcggttaagcattctgtctgaagggtga
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