Thermodesulfobacterium geofontis: TOPB45_0227
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Entry
TOPB45_0227 CDS
T01547
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
top
Thermodesulfobacterium geofontis
Pathway
top01501
beta-Lactam resistance
top01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
top00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TOPB45_0227
01503 Cationic antimicrobial peptide (CAMP) resistance
TOPB45_0227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
top02000
]
TOPB45_0227
01504 Antimicrobial resistance genes [BR:
top01504
]
TOPB45_0227
Transporters [BR:
top02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TOPB45_0227
Antimicrobial resistance genes [BR:
top01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TOPB45_0227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
COX2-transmemb
MMPL
Motif
Other DBs
NCBI-ProteinID:
AEH22342
UniProt:
F8C2W3
LinkDB
All DBs
Position
214960..218094
Genome browser
AA seq
1044 aa
AA seq
DB search
MISQFFIRRPRVALVSAIAVVLLGLISLSVLPVKEYPALTPPQIVVTARYPGADSETIAK
TVAAPLEEAINGVDGMLYMVSSSTSAGVYTLNVYFEVGWDPNVAKMDVNNRVQIALPRLP
EEVRRLGVEVRERSPDILKVVAFYSEGGQRDVVELANFLLINVIDELKRVPGVADAILVD
PKVYSIRVWLLPDKLSMYGLTPLEIYQAISQQNQQFTAGALADEPTTERPFFTYVLRGSD
RFSSAKQFEEILVKVLPDGSTLKLKDVARVELTSEQFNRNSFFKKQKVLPVPIFLTSRAN
ALEVSKLIDEKLKELSKTWPPDIKYYFPYNPTVFVKESIKEVWITFGLAILFVVIVTYFF
LGGLAPTIVPTLAIPVSIFGAFIVMYVLGFSVNLLTLFGLILAIGLVVDDAIIVVENVER
HMEEGLPVKEATLKAMEELTSPLIAIVLVLSAVFIPASLVGGFIGRFYQQFAVAIASSVL
ISGMTALVFSPVLCTLLLRERELHKRPIYPVYLFQLIFNRARESYVERIKFLLKRPAIFV
LLFLLILPLTYVLIKRLPTALVPTEDKGALFLIGNLPPGSSLKRTEEVLSKIEDIFMKNP
YIDRYVAISGFDLQGFTYSTDSLGGFIGLIDWSKRTKKEETSFALTQRINKELSQIREAV
LFVVSPPAIMGFGRVGGFDLYLEDRTGGDIRQMFEVAQGFINKLRERKELTLVRTTFNPS
NPYFEVIVDRTKAEAYGVSVNDVYKTLSMTLGASYVNDFNLFDRVYRVYLQAEFDYRKAF
DDLSKVYVKNKNGVPIPVANLVEIKPLSRPQLLERHNQFKAVRILGEPASGYTTGDAIRV
VEKVAKATLPPGYTIGWVGQSLQEVLSQQKGYVVLAMAVLFVYLILVALYESWLAPIAVI
LSIPFALLGASLTLNLLKLPNDVYFQVGLVTLVGLSAKNAILVVEFAEERIRRGMDIISA
ILEASYLRFRPIVMTSFAFIAGAIPLALSTGAGAMSRHVIGWTVVGGMLFATLLGTLFIP
LLYYVIKALSLKSLKILKRGKENA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgatatcccagttttttattcgcagaccaagggtagctttagtttcagccattgcagtc
gtgcttttagggttgatttcactttctgtcttaccagttaaggagtatccagcccttact
ccaccccagatagtggttactgcaaggtatccgggagctgattctgaaacgattgccaaa
acggttgctgcccctcttgaagaagcgataaacggcgttgatggtatgctctacatggtt
tcttcttcaacctcagcgggagtttacaccttgaatgtttactttgaggttggctgggac
cctaatgtagcgaaaatggatgtaaacaaccgcgttcagattgcgctgccgaggcttcct
gaggaggtaagaaggcttggcgttgaagttcgggaaagaagcccggatatacttaaagtt
gtagccttctactctgagggagggcagagggatgtagtcgaacttgctaacttccttctc
atcaacgtaatagacgagttaaaaagagttcccggtgtagccgatgccattctcgttgac
cctaaggtatattctatcagggtgtggcttttgcctgataaactttctatgtatgggtta
acgccccttgaaatctatcaggcaatttctcaacagaaccagcagtttaccgctggtgcc
ttggcggatgagccaaccacagagagacctttctttacctatgttcttagaggtagcgat
aggttctcctcggctaaacagtttgaagagatactggttaaagttttgcctgatggttcg
accttaaagcttaaagatgtggcaagggttgagctaacctctgagcagtttaaccgcaat
tccttctttaagaagcaaaaggttttacctgttcccatctttcttacaagcagagcaaac
gcccttgaggtttcaaagcttattgacgaaaagctaaaggagttaagcaaaacctggccc
ccagacataaagtactattttccctacaaccctacggtttttgttaaagaatcgatcaag
gaagtgtggataacctttggacttgccatcctttttgtagtcattgtgacctactttttc
cttggggggcttgctccaacaatcgttccaaccttagccattccagtctccatctttggt
gcctttatcgttatgtatgttcttggcttctcagtaaaccttcttaccctgtttgggttg
atcttagccattgggcttgtggttgacgatgccatcatcgtcgttgaaaacgtggaaaga
catatggaagaggggctaccggtaaaagaagcaactctaaaagccatggaagagcttacc
tcaccgcttatcgccatcgttcttgtgctttctgccgtctttataccggcaagccttgtt
ggcggttttatcggaaggttctatcaacagtttgccgtagctatagcaagctcggtgctt
atttcaggtatgactgccttggtttttagcccagtcctctgtacccttctccttagggaa
agggagctacacaaacgccccatctatccggtttatctttttcagcttatctttaaccga
gcaagggaaagctatgtagagcggataaagtttctcttaaagagacccgcaatctttgtc
ttgctattccttttaattctacctctaacctatgttttaataaaaaggctacctactgct
cttgtccctactgaggataaaggggctctttttttgatcgggaaccttccaccaggtagt
tcccttaagcggacggaggaggttctatccaagattgaggacatctttatgaagaaccct
tacattgaccgctacgttgccatctcgggctttgaccttcagggctttacctattctaca
gattctttaggtggctttataggattgatagattggagcaaaaggactaagaaggaagag
acctcttttgcccttacccaaaggataaacaaagagctttctcagattagggaagccgtg
ctttttgtggtaagtcctccggctattatggggtttggaagagtaggagggtttgacctt
tatcttgaggatagaaccggtggtgatataaggcagatgtttgaggttgctcaaggtttt
atcaacaagcttagagaaagaaaggagctaaccttagttagaacaaccttcaacccctca
aacccttactttgaggtaatagtcgaccgaacgaaggctgaagcctacggggtctcggtt
aacgatgtatataagactttgagcatgaccttaggggcaagctatgtgaacgattttaac
ctctttgacagggtttaccgagtataccttcaagcagaattcgattatcgtaaagcattt
gatgaccttagcaaggtctatgttaaaaataaaaatggcgttcccatccccgttgctaac
cttgtagagattaagccccttagcagaccgcagctccttgagaggcataatcagtttaaa
gcggtgcgcatccttggtgagcctgcttctggctacacaaccggcgatgccataagggtg
gttgagaaagtagctaaggctacccttccccctgggtataccatcggttgggtggggcaa
agcttgcaggaggttttatcccagcagaagggttacgtcgtccttgccatggctgtcctc
tttgtctatcttatccttgtagctctttatgaaagctggcttgctccgattgcggttatc
ctctccattcccttcgcccttctcggggcaagcttaaccttaaaccttttgaagcttccc
aatgatgtgtattttcaggttgggcttgtgaccttggtaggtctttccgcaaagaacgct
atccttgttgtggagtttgccgaagagcgtatcagacgaggtatggacatcatctcagcc
attcttgaagcttcctatcttaggtttagaccaatagttatgacctcttttgcctttatc
gctggagccatacccttagcgctaagcacaggagctggcgccatgagtagacatgttatc
ggttggactgttgtcggaggtatgctctttgcaacccttttgggaaccctctttatcccg
cttctctactatgtgataaaggctttgagcttaaagagcttaaaaatccttaaaagaggc
aaagaaaatgcgtaa
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