Thermodesulfobacterium geofontis: TOPB45_0939
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Entry
TOPB45_0939 CDS
T01547
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00300
Lysine biosynthesis
top00550
Peptidoglycan biosynthesis
top01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TOPB45_0939
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TOPB45_0939
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
top01011
]
TOPB45_0939
Enzymes [BR:
top01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
TOPB45_0939
Peptidoglycan biosynthesis and degradation proteins [BR:
top01011
]
Precursor biosynthesis
Amino acid ligase
TOPB45_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Arf
Motif
Other DBs
NCBI-ProteinID:
AEH23036
UniProt:
F8C5Q0
LinkDB
All DBs
Position
923682..925175
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AA seq
497 aa
AA seq
DB search
MKPLGELIKNLEIIKAYYGSQPIENFAPYKYLKIRGISENSKEIEDGFIFVARKGTNFNG
EAFIEEAINNGALIIIRESDINSKETYPGTIQIQVKDIKKALSTLSLNFFENPQEKIFLI
GVTGTNGKTSVSYFTKNILNFLGVKCGYIGTLFYETDRIIPALETTPSILKISSLLKEMV
DKNFKACVIEVSSHALHQDRLLGLFFDIAAFTNLSRDHLDYHKDMEDYYQAKKKLFKEYL
KENSKIVISLESEYGKRLAEELKDFSPLLVNNEEIKSEILRKKNKLSLKIKIKDKEYEIS
TQLLGDYQAKNLTTTLGILLAMGYKIEDLLEPIKKLKNPVGRLELVTEYKGAKIFVDYAH
TPEALAEALKSLSSIKENRLIVLFGCGGNRDKGKRPLMGKVASMLADGIILTSDNPRFED
PLKIIEDIEKGINSSKPYKIIPDRRSALEFAIKNLQEGDVLLVAGKGHETYQEIEGKRYP
FSDQEEILKIISTLDLK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttaggagaacttattaaaaatttagaaattataaaggcttattatggaagc
caacctatagaaaattttgcaccatataaatatttaaaaataaggggaatttctgaaaat
tctaaagagattgaagatggatttatctttgttgcaagaaagggaactaattttaatgga
gaagcttttatagaagaggctattaataatggagctttgataattattagagaaagtgat
attaattctaaggagacttacccaggaactattcagattcaagttaaagatattaaaaaa
gccttatctaccctttctttgaatttttttgaaaatcctcaagaaaaaatatttttaatt
ggtgttacaggaacaaatggaaaaacttcagtaagttatttcactaaaaacattttaaat
tttttaggtgttaaatgtggatatataggaactcttttttacgaaacagatagaattatt
cctgcccttgaaactacaccttccattttaaaaatttccagtctattaaaagaaatggta
gataaaaattttaaagcttgtgtaattgaagtttcctcacatgctttacatcaagataga
cttttggggcttttctttgacatagcagcttttactaatctttcaagagatcatttagat
tatcataaagatatggaagattattatcaagcaaagaaaaaactttttaaagaatattta
aaagaaaattctaaaatagttatttccttagaaagcgaatatggtaaaagattagctgaa
gaattaaaagatttttctccgcttttagttaacaatgaagaaattaaaagtgaaatatta
aggaaaaaaaacaaattaagccttaagattaaaattaaagacaaagaatatgaaatttca
acacaacttttaggagattatcaagctaaaaatctgaccaccactttaggaattctttta
gctatgggatataaaattgaagacctcttagaacccattaaaaaacttaaaaatcctgtt
ggaagactggaattggtaactgaatataaaggtgctaaaatattcgtagattatgcacat
acaccagaggcattagctgaagctttaaaaagtttaagttcgattaaagaaaatagatta
attgtgctttttggttgtggtggaaatagagacaaaggtaaaagacctcttatgggtaag
gtcgcaagtatgcttgctgatggaataattttaacttcagataatccaagatttgaagat
ccattaaaaattattgaagatattgaaaaaggtattaattcgtcaaagccttataaaatt
attcctgacagaagatctgctttagaatttgctattaaaaatttacaagagggggatgtt
cttttagttgccgggaaggggcacgaaacttatcaagagatagaaggtaaaagatatcct
ttttctgatcaggaagaaattttgaaaattataagtaccttagacttaaaatga
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