Thermodesulfobacterium geofontis: TOPB45_1347
Help
Entry
TOPB45_1347 CDS
T01547
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00790
Folate biosynthesis
top01100
Metabolic pathways
Module
top_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
TOPB45_1347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
top03016
]
TOPB45_1347
Enzymes [BR:
top01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
TOPB45_1347
Transfer RNA biogenesis [BR:
top03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
TOPB45_1347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AEH23428
UniProt:
F8C2N1
LinkDB
All DBs
Position
1343471..1344112
Genome browser
AA seq
213 aa
AA seq
DB search
MSKLKISEIFFSLQGEGPLIGYPTLFVRLFGCNLNCSWCDTPYAKGENPYEEKEISEIIS
FWKKNFSSIPFITITGGEPLIQSSVYNLIDAFLKLGCTIALETNGSISLDKVPKEVIKVM
DVKTPSSKMDKYNLYENFKFLTKKDAVKFVIKDREDFDFAIDIVEKFYLTYYTQVFLSPA
YPFLDPKILANWILETKKPIRFQIQLHKIVGIK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaaattaaaaatttctgagatattttttagtctccaaggagagggtcctctcata
ggttaccctaccctatttgttagactttttggctgtaatctaaactgctcctggtgtgat
accccctatgcaaaaggagaaaatccttatgaagaaaaagaaatctctgaaataatttct
ttttggaaaaaaaattttagctctataccttttataactattactggaggagaacctctt
attcaaagctctgtttataatttaatagatgcgtttttaaaacttggttgtactatagct
ttggaaaccaatggaagtataagtttagataaagtccctaaggaagtaataaaggttatg
gatgttaaaactccttcttctaaaatggataagtataatctctatgaaaactttaaattt
cttactaaaaaggatgcagtaaaatttgtgataaaagaccgagaagattttgattttgct
atagatattgtagaaaaattttatctcacctattatactcaggtctttctatctcctgct
tatccctttttagaccctaaaatcttagcaaattggattcttgaaactaaaaaacccatt
agattccaaatacagcttcataaaatagtaggaataaaataa
DBGET
integrated database retrieval system
