Thalassolituus oleivorans R6-15: R615_13425
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Entry
R615_13425 CDS
T03056
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor00300
Lysine biosynthesis
tor00550
Peptidoglycan biosynthesis
tor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R615_13425
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R615_13425
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tor01011
]
R615_13425
Enzymes [BR:
tor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
R615_13425
Peptidoglycan biosynthesis and degradation proteins [BR:
tor01011
]
Precursor biosynthesis
Amino acid ligase
R615_13425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AHK16539
LinkDB
All DBs
Position
complement(2878672..2880141)
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AA seq
489 aa
AA seq
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MKLSAIAAPHLFIPPEWDREINHIVIDSRDVKQGDLFIARVGRDNHGERFIETAIQAGAS
AVVALGEPSFRCGILGVPIFSMPDLLDHLSDWLHRAYAGVSQLDLIAVTGTNGKSSVTQY
IAQLLTQMKIECGLLGTLGNGIWPNLAETRNTTADLSVVLRHLNDMAEQSVKYAALEVSS
HGIDQRRIDGIHFKVAVLTNLTRDHLDYHGSMEAYFEAKRRLFVGGNIGAALINIDDGYG
RRLAADKDITVPVFTYGRSDKAEVRYHNVELNARGMTATLTTPWGEADIVLPLIGEFNLA
NATAAIAVLAIQGFPFESLVTAASTLQSVAGRMEVYVKDNAPLAIVDFAHTPDALDNVLN
ALKPWNKAISLVFGCGGERDRTKRPIMAVIAQAHAAQVWLTDDNPRGENSDQIFSDVLAA
DGSDNFYCIHDRRKAIESALEKTDKDGIVVITGKGHEAYQEISGTRHAYSDAGVLIAQGY
RKAGEDYVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcagtgcaatcgctgcgccgcatttgtttattccccctgagtgggatcgcgaa
attaatcatatcgtgattgatagtcgtgacgttaagcagggtgatttatttatcgctcgt
gttggtcgtgataatcatggcgagcgttttattgagaccgctattcaagccggagccagc
gctgttgttgctttgggtgaacctagttttcgttgtggaatattaggtgtgccgattttt
tcgatgccggatttattagatcatctaagtgattggttgcatcgtgcctatgcaggcgta
tctcaacttgatttgatcgctgtcactggcactaacggtaaaagttctgttacgcaatat
attgcccagctactgacacaaatgaaaatagagtgtggtttgctcggaactttgggtaac
ggcatttggcccaatttagctgaaactcgcaatacaaccgccgacttatctgtggtgtta
cgtcatttaaatgatatggcggagcaatcagtaaaatacgccgcgttagaagtttcttcg
catggaatagatcagcgccgcattgacggaatacatttcaaagtagcagtgctgactaat
ttgacccgtgaccatttagattatcacggttctatggaagcctattttgaagcgaagcgt
cgcctctttgttggcggcaatattggtgctgcgctcataaatattgatgatggttatgga
cgccggttagcggcagataaagacatcacagtaccagtgtttacctatggccgtagtgat
aaggcagaggtgcgttatcacaatgtcgagttaaacgctcgcggtatgacagcaacgctg
accacgccttggggcgaagccgatattgttttgccattaattggcgaatttaatttggct
aatgctacggcggcaattgctgtattggctattcaaggtttcccttttgaatccctagtt
actgcagcttcaacactacagtctgtcgccggtcgcatggaagtatacgtaaaagataat
gcgcccctagcgatagtggatttcgctcacacgccagatgcactagataacgtcttaaat
gctttaaagccatggaataaagctatttctttggtgtttggttgtggtggtgaacgcgat
cgaaccaagcgcccaatcatggcggttatagctcaagcgcacgctgctcaagtttggttg
accgacgataatcctcgtggtgaaaacagcgatcaaattttttctgatgtattagcggct
gatggctcggataatttttattgtattcatgatcgtcgcaaggctatcgaaagtgcacta
gaaaagacagataaagacggcattgtggtaattactggtaaggggcacgaagcttatcag
gaaatttctggaactcgccatgcttatagcgatgctggcgtattaatagctcagggttat
agaaaagcaggagaagattatgttgcgtaa
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