KEGG   Theileria orientalis: TOT_020000354
Entry
TOT_020000354     CDS       T03460                                 
Name
(RefSeq) small nuclear ribonucleoprotein associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tot  Theileria orientalis
Pathway
tot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TOT_020000354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tot03019]
    TOT_020000354
   03041 Spliceosome [BR:tot03041]
    TOT_020000354
   03032 DNA replication proteins [BR:tot03032]
    TOT_020000354
Messenger RNA biogenesis [BR:tot03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TOT_020000354
Spliceosome [BR:tot03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TOT_020000354
  U2 snRNP components
    TOT_020000354
 Complex B
  U1 snRNP components
    TOT_020000354
  U4/U6.U5 tri-snRNP components
    TOT_020000354
 Complex C
  U2 snRNP components
    TOT_020000354
DNA replication proteins [BR:tot03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TOT_020000354
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 20714508
NCBI-ProteinID: XP_009690392
UniProt: J4C3A3
LinkDB
Position
2:complement(join(726802..727089,727160..727333))
AA seq 153 aa
MAGKNTRMQHWLQYNVRVTLKDNRKFVGTLVAFDRHMNLVLSDCEEFRMTLGKDKNRTEI
KRTLGFVLLRGENIVSFTAKSPANPLHMGYGVGPGKAAPAGRGAPLMVGVGPGMPPIAPN
ASALQAPMRGLIGSAPAQLQPTGVQGTMPPMSN
NT seq 462 nt   +upstreamnt  +downstreamnt
atggctggaaagaatacccgtatgcaacattggttgcaatataacgtcagagtcacccta
aaggataaccgaaaattcgtcggaacactggtcgccttcgatagacacatgaacttggtt
ttatcagattgtgaggagtttcgaatgactttagggaaggacaaaaacagaaccgagata
aagcgcacccttggcttcgtgctactgaggggagagaacatagtttcatttacagcaaag
tcgcctgcgaatcccttacacatgggatacggcgtgggacccggaaaggcagcaccagca
ggaaggggagcaccgctgatggtcggcgtgggccctgggatgcctccaatagctccgaac
gcatccgcacttcaggcaccaatgcgtggcctaattggaagcgctccggcacagctgcag
ccgacgggtgtgcagggaacaatgccgcccatgtccaactaa

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