KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128074272
Entry
128074272         CDS       T08967                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain-like
  KO
K06752  MHC class II antigen
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04145  Phagosome
tpai04514  Cell adhesion molecules
tpai04672  Intestinal immune network for IgA production
tpai05164  Influenza A
tpai05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128074272
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128074272
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128074272
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    128074272
   05168 Herpes simplex virus 1 infection
    128074272
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpai04147]
    128074272
Exosome [BR:tpai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128074272
  Exosomal proteins of epithelial cells
   128074272
  Exosomal proteins of breast milk
   128074272
SSDB
Motif
Pfam: C1-set Ig_2 Ig_3 MHC_II_beta ig C2-set_2
Other DBs
NCBI-GeneID: 128074272
NCBI-ProteinID: XP_052525915
LinkDB
Position
Unknown
AA seq 278 aa
MWGGGRGGAAPPTPPAPPSAMLVLLGLLLGTRGAGAFMVHMASSCPLAANGSLLGFDLTV
AFNKNPLVCYDPDVRRFNACDWKLLHNVAGRIASALNNGSTWVQRAEARRRACSKVAARF
WAQTALRRTQPQVRIIPAQTGNPSVPIRLTCHVWGFYPPEVTIIWLHNGDIVGPGDHSPV
SAIPNGNWTYQTQAALSVAPGLGDTYTCSVQHASLEEPLLEDWRPGLTLEVTLMVAVATV
TMVLGLGLLLTGVYCWRAQPPAPGYTPLPGHNYPSGSI
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtggggtggagggaggggaggggccgcccccccaacccctcccgctcccccctccgcg
atgttggtgctgctggggctgctgctgggaacgcggggggcaggtgccttcatggtgcac
atggccagctcctgcccgctggcagccaacggctctctgctgggcttcgacctcaccgtg
gccttcaacaagaaccccctggtgtgctacgaccccgacgtccgccgcttcaacgcctgc
gattggaagctgctgcacaacgtggccggacggattgccagcgccctcaacaacggcagc
acctgggtgcagcgcgcagaggcgcggagacgggcgtgcagcaaagtggctgcacggttc
tgggcacagacagcgctgcggaggacccagccccaggtccgcatcatccctgcacagaca
gggaaccccagcgtgcccatccgcctcacctgccacgtgtggggcttctacccccccgag
gtgaccatcatctggctgcacaacggggacatcgtggggcctggagaccactcgcccgtg
tccgccatccccaatgggaactggacctaccagacacaggcggccctttcagtggccccg
gggctgggggacacctacacgtgctcagtgcagcacgccagcctggaagagcccctcctg
gaggactggcgtccggggctgacactagaggtgactctgatggtggctgtggccactgtc
acgatggttctggggctcggcttgcttctcactggtgtctactgctggcgggcccagccc
cctgccccaggttacaccccacttcccggtcacaactacccttcaggcagcatctga

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