KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128074273
Entry
128074273         CDS       T08967                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain-like
  KO
K06752  MHC class II antigen
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04145  Phagosome
tpai04514  Cell adhesion molecules
tpai04672  Intestinal immune network for IgA production
tpai05164  Influenza A
tpai05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128074273
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128074273
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128074273
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    128074273
   05168 Herpes simplex virus 1 infection
    128074273
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpai04147]
    128074273
Exosome [BR:tpai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128074273
  Exosomal proteins of epithelial cells
   128074273
  Exosomal proteins of breast milk
   128074273
SSDB
Motif
Pfam: C1-set Ig_3 Ig_2 MHC_II_alpha C2-set_2
Other DBs
NCBI-GeneID: 128074273
NCBI-ProteinID: XP_052525917
LinkDB
Position
Unknown
AA seq 260 aa
MGAASGRGALVAALLGAALGSVRAEPSLHTLSEVLFCQPDTPSLGLSVAFDSEQLFSFDV
PSLQWLPQLPDGPAWPTGTEQPQELEHDTTLCRNLHDGLTKIATELLPMPEAKGIPVADV
FLQQPLQLGYPNTLVCMVGNIFPPAITISWQRDGVPVTDGVTQLTYIPMEDLSFMRFSYL
AVTPHSGDIYSCVVTRERDNISVVAYWVPQDPIPSDTLAMAVCGAVTALGVLLALLGLGL
LLSARRRSMWGQRGHRPRTH
NT seq 783 nt   +upstreamnt  +downstreamnt
atgggggctgcgagcgggcgcggggcgctcgtggcagctctgctgggggcggcccttggg
agcgtcagagccgagccatcgctgcacaccctgtccgaggtgctcttctgccagccggac
acgccgtcgctggggctgtcggtagccttcgactcggagcagctcttctcattcgatgtc
cccagcttgcagtggctgccgcagctccccgatggccccgcgtggcccacaggcaccgag
cagccccaggagctggagcacgacaccacgctgtgccgcaacctacacgacgggctcacc
aagatcgccactgagctgctgccaatgcctgaagccaagggcatcccggtggctgacgtc
ttcctgcagcagccgctgcagctgggctatcccaacaccctggtctgtatggtgggcaac
atcttccccccggccatcaccatcagctggcagcgggacggcgtccccgtcaccgacggc
gtcacccagctcacctacatccccatggaggacctgagcttcatgcgcttctcctacctg
gcggtgacgcctcactctggtgacatctactcctgcgttgtcacccgcgagagggacaac
atctctgtggtggcttattgggtgccgcaggaccccatcccttcggacacgttggccatg
gcggtgtgcggcgctgtgacggcgctgggcgtcctgctggcactgctgggtttggggctg
ctgctttctgcccgccggcgcagcatgtggggacagcggggacatcgaccccgtactcat
tga

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