Tympanuchus pallidicinctus (lesser prairie-chicken): 128074477
Help
Entry
128074477 CDS
T08967
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00280
Valine, leucine and isoleucine degradation
tpai00650
Butanoate metabolism
tpai00900
Terpenoid backbone biosynthesis
tpai01100
Metabolic pathways
tpai03320
PPAR signaling pathway
Module
tpai_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128074477 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128074477 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128074477 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128074477 (HMGCS1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
128074477 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Cullin
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
128074477
NCBI-ProteinID:
XP_052526330
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MRPRWQPAMGFRSVSATMPGSLPVNTESCWPKDVGIVALEIYFPSQYVDQTELEKYDGVD
AGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKS
VKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVY
ATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQ
CYLSALDRCYSVYRNKIHAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLNDF
LSDQNAETANGVFSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNG
NMYTPSVYGCLASLLAQYSPERLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKIT
ASLSDLKARLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKH
RRTYARRPVMVDGPLEAGVEVVHPGIVHEHIPSPAKKVPRIPATTESEGVTVAISNGEH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcgctggcagccggccatgggcttccgcagcgtatctgccacgatgcccggg
tctcttccagtgaacactgaatcctgctggcccaaagatgtgggtattgttgcactggaa
atctattttccctctcagtatgttgaccagacagagctggagaagtatgacggtgtggat
gcaggcaaatacaccattgggttaggccagtcaaagatgggcttctgctctgaccgagag
gatatcaattccctctgtttgactgtggttcagaagcttatggagaggaacagcctatcc
tacgactgcattgggagactggaagttggaacggagacaataattgataaatcaaaatcg
gtgaagactgtcctgatgcagctgtttgaagaatctggtaatacagatgtagaaggaatt
gacacaaccaatgcgtgctatggaggcactgctgctctttttaatgctattaattggatt
gagtccagttcttgggatggacgctatgcacttgttgttgctggagacattgccgtgtat
gccactggaaatgccaggccaacaggtggagctggtgctgttgctatgctagttggtcca
aatgctcctctaatttttgagagaggattgcgtggtacccacatgcagcatgcttatgac
ttctataaaccagatatggtctctgaatatcctgtagttgatggcaaactgtctatacag
tgctacctcagtgcattagatcgctgctatagtgtttatcgcaacaagatccatgcccag
tggcaaaaagaggggacagacagacgtttcaccttgaatgactttggattcatgatcttt
cattctccctactgtaaactggtacagaagtctgtggcaaggctattgctgaatgacttt
ctcagtgaccagaatgcagaaacagcaaatggtgttttcagtggtctggaagctttcagg
gatgtaaagcttgaagatacatattttgacagggatgtggaaaaagcttttatgaaagct
agtgcagagctcttcaatcagaaaaccaaagcttctttacttgtgtccaatcagaatgga
aacatgtacacgccttcagtctacggttgccttgcttctcttctagcccaatactctcca
gagcgccttgcaggacaaagaattagtgtgttctcctatggctctggttttgctgctaca
ctgtattccatcagagttacacaggatgccactcctggttctgcactggacaaaattact
gccagcctttctgatcttaaagcaagacttgactcaagaaaatgcattgcacctgatgtc
tttgctgaaaacatgaagattagacaggagacacatcacttggccaactatattccacag
tgttcagtagaagatctctttgagggaacatggtatcttgtgcgtgtggatgagaaacat
agaagaacatacgcgcggcgcccggttatggttgatggacccctggaggcaggagttgaa
gttgtccacccaggcattgttcatgagcacatcccaagccctgctaagaaagtgccaaga
atccctgcaacaacagaatctgaaggcgttactgttgccatttccaatggggagcattaa
DBGET
integrated database retrieval system
