Tympanuchus pallidicinctus (lesser prairie-chicken): 128076003
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Entry
128076003 CDS
T08967
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128076003 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128076003 (TRPC5)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128076003 (TRPC5)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128076003 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
128076003
NCBI-ProteinID:
XP_052529218
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSVEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHCVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSFWYLCKWIHNQLCPGSDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDETNEDSAGEKPKVKSVSFNVANKKKDFNVSALIKTMSGIDMVEEKPKSNGISKRSFI
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEANSEPMYTISDGIIQPHYMWKDIKYSQ
IDKEREENCSKSEINLNEVDYSRNTRLTGQSKECPVVCTSSLHCASSICSSNSKLLDSSE
DVFDSWGEACDLFINQWKEGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtaaactattcaccatacagagatcggatcccactg
cagattgtgcgagcagaggcagagctctcagtggaagagaaggcctacctcagtgctgtg
gagaagggggactatgccagtgtgaaacatgccttacaagaggcagagatctactacaac
atcaacattaactgtatggatcctcttggtcgcagtgcccttctaatagccatagagaat
gaaaatctggagatcatggagttacttctgagccactgcgtgtatgtgggagatgctctg
ctgtatgcaatacggaaagaggtggtgggagctgtggagctgctgctgaattacaggaag
ccaagtggtgaaaaacaggttccgaccttgatgatggacacacagttttcagaattcact
ccagatatcacaccaataatgctggcggctcacaccaacaactatgaaatcatcaaactg
cttgtccaaagacgggtaactattccacgcccacatcagatcagatgcaattgtgtggag
tgtgtctccagttcggaggtggacagcctgaggcattccaggtcaaggctgaacatctac
aaagccttagccagcccctcattgattgccttatcaagtgaggaccccatcttgacagcg
tttcgactgggctgggagctgaaagagctcagcaaagtggaaaatgagttcaaggctgaa
tatgaagagctttctcagcaatgcaagcgatttgctaaggaccttttggatcaagcacgg
agttcccgagaattagagattattctcaatcacagagatgatcaaagtgaagagctggac
ccccaaaaatgtcatgatttggcaaaactaaaggtagcaataaagtaccaccagaaagag
tttgttgctcagccaaactgccagcagctactagcaacactttggtatgatggttttcca
ggctggaggcggaaacactgggcagtaaaactcttgacctgtgtcaccatcggactgcta
ttccctgtgctatctgtggcatatctgattgcaccgaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggctcatacctaaccttcctcttcatg
ctcctgctggcatcgcagcatatcgtcaggactgaccttcacatgcagggaccacctccc
accatcgtggagtggatgatcctgccctgggttctaggttttatctggggagaaatcaag
gaaatgtgggacggtggattcaatgaatacgtacatgactggtggaatctgatggatttt
gcaatgaactccctctatcttgcaactatctcccttaaaattgttgcctatgtcaagtac
aacggttcgcgtccaagggaggaatgggaaatgtggcacccgactctcattgcagaagcc
ctctttgcaatatccaacattttaagttctttgcgcctcatatccctgtttacagcaaat
tcacacctgggacccctgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgtctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtctctcttctggtctgtgttt
ggactgctgaatctctacgtcaccaatgtgaaagccagacatgagttcacagagtttgtt
ggggccactatgtttggtacctacaacgtcatctctcttgtcgtgctgctgaacatgctc
atagccatgatgaacaactcctatcagctcatcgctgaccatgcagacatagagtggaag
tttgcacggacaaagctatggatgagttactttgatgaaggggccaccctgcctcctccc
tttaacatcatcccaagtcccaagtctttctggtacctctgcaagtggattcacaatcag
ctgtgtccgggcagtgattctgacaatgagcagaagagacatgaaaacctcaaaacattc
acggagcgccatgctgataacctcatccagaatcaacattaccaggaagtgattagaaat
cttgtaaaaagatatgttgcagcaatgataagaacttccaaaaccaatgaaggcttaact
gaagaaaatttcaaggaattaaaacaggacatctcaagttttcgctatgaagtccttgac
ctgctgggaaacaggaagccacagaggagaagttattctaccagtagcacagaggtgtct
caaaaggatgaaacaaatgaggatagtgctggagaaaaacccaaagtcaaaagtgtgtct
ttcaatgtagccaacaaaaaaaaggatttcaatgtatctgcgctaattaaaacaatgtct
gggattgatatggtggaagagaagccaaaaagcaatgggatcagtaagcgctccttcatc
cgaaatggaaatagagttcagaggctttccagttccaagaaagagtcctttaagagactg
gggctgctgttctccaagatgaatggacatgtacctgaagcgaattcagagcccatgtac
actatttcagatggaattattcagccacactacatgtggaaagacatcaaatattctcag
attgataaagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtagac
tacagtaggaacacaagacttacaggacagagcaaggagtgccctgtggtttgtaccagc
tcccttcactgtgcttccagtatttgttcctctaattccaaacttttagactcatcagag
gatgtgtttgattcatggggagaggcttgtgacttgtttataaaccagtggaaagagggg
caagaggaccatgttacaacgcgactataa
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