Tympanuchus pallidicinctus (lesser prairie-chicken): 128076423
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Entry
128076423 CDS
T08967
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530
Tight junction
tpai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128076423 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128076423 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128076423 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
128076423 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
PH_11
RNA_pol_Rpc82
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
128076423
NCBI-ProteinID:
XP_052530008
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MFVLLMMNDCEAMGNAESQNVEHAFYGDKHASLGRKHTSRSLRLTNKASRRTRHASSGKI
IHRNSEVSTRSSSTPSIPQSLAENGLEPFTQEANLEDFGSPIWVDRVDMGLRPVSYHTDS
SVTPSMDSSTVLTAASVQSMPDSEESRLYGEETPFLAEGDGRLRRYAPNGTRFVETASFK
KKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDVETARGTEAECSPQQLVGC
QRANSMSDLYSPKAPSATINGGPRNAFGGYCRNLVSDIPDIGSHKMASGAAEDAPSYSNY
NTLPCRKSHCLSEGATNPQMSHSNSMQGRRAKTTQDVNVGEGSEFTDSGIEGAATDTDLL
SRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENMEEAGS
ALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYW
VSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFL
FQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEM
QLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRP
TKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKK
QGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTP
SWFCLPNNQPALTVIRPGDTSRDVLEMICKTHQLDHSAHYLRLKFLIENQMQFYVPKQEE
DIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNGVKETGLAFK
KGLKAGDEIVEINKKAAEDLDSALLKDVLIQPSLCLTVRTYPEIEEGQKLMQPPPRRLEN
PSDLSDSTLVFSGSNQGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFC
RSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERY
LKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLF
SLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYL
IKPIQRILKYPLLLKELFALTDVDSEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFD
QLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKD
GSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESE
GRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALK
GARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVFTSSPEKEPQQPTHGGDTDRWVEE
QFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITCRGDRSRPAMDT
HASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctactgatgatgaacgactgtgaagccatgggaaacgcggaaagccaaaac
gtagagcatgccttctatggagacaagcacgccagcctgggccgcaagcacacctcacgt
tcacttcgcctcaccaataaagcttctcgccggacccgacacgcttcttctggcaaaatt
atccacaggaactcagaggtgagcacccgctccagcagcacccccagtatcccccagtca
ctggcagagaacggtctggagccctttacccaggaggccaacctcgaggactttgggagc
ccaatctgggtggaccgtgtggacatgggcttgcggcccgtctcctaccacaccgactcc
tctgttacgcccagcatggacagcagtactgtgctcaccgcagcctctgtgcagagcatg
cccgactctgaggagagccggctgtatggagaggaaacaccattcctggctgaaggcgac
gggaggctgcgccggtacgcgccaaacgggacgaggttcgtggagacagccagcttcaag
aagaaacgctccaaatcggccgatatctggcgggaggacagcctggagttttcactttct
gacctcagccaggagcatttgacaagcaatgaggaaatcctgggcttggccgaagagaag
gacgttgagacggcccggggaacggaggctgagtgcagcccccagcagttggttggctgc
cagcgtgctaactccatgagtgacttgtactcccccaaagccccaagtgctacaataaat
gggggcccacgcaatgcttttggagggtactgccggaatttagtgtctgacatcccagac
attggcagccataagatggcatctggtgctgccgaggatgcgccttcctacagtaactac
aatacgctgccctgcaggaagtcccattgcctttcagaaggagccaccaacccacagatg
agccatagtaacagcatgcagggcaggagggcaaaaactactcaggatgtcaacgtgggt
gaagggagcgagttcactgacagtgggattgagggagcagccaccgacactgacctcctt
tccagacgctccaatgccaccaactcgagctactcaccaacagccagtcgggctttcatc
ggcagcgacagcgggagcagctcaacgggcgacgggcttcgccagggggtgtatgagaac
ttccgccgggagctggagatgagcaccaccaacagtgagaacatggaggaggccggctct
gccctcagcgatgagcagagcagcggcacgctcagctccccggggcagtcagacattctc
ctgactgctgcccagggtacggtacggaaagccggtgctctggcagtgaaaaactttttg
gtgcacaaaaagaataagaaagtggagtcggccacgcgcaggaagtggaagcactactgg
gtttccctgaaaggatgcacgttgtttttttatgagactgatggccgatccggcattgac
cacaacagcatcccaaagcacgccgtctgggtggaaaacagcatagtgcaagcggtgcct
gaacaccccaagaaggactttgttttctgtctcagcaattctcttggggatgctttcctc
tttcagacctctagccagactgaactcgagaactggatcactgcaatccattcagcttgt
gcaactgcagttgcaaggcagcatcacaaagaggacactgtcaaactcctgaaaacagag
ataaaaaagctggagcagaagatcgatatggatgagaagatgaagaaaatgggtgaaatg
cagctgtcctcagtaacggactccaagaagaagaagaccatactggatcaaatttttgtt
tgggaacaaaatcttgaacagttccagatggatctatttcggtaccgctgttacttggct
agtctccaaggaggggagctcccaaaccctaaaagactgcttgcttttgccagccgtcca
actaaagttgcaatgggccgccttggaatcttttcagtctcttcgttccacgcactggtg
gcggctcgcacaggggagtccggtgtgaggagaaggactcaagccatgtccagatctgcc
agcaaacggagaagcaggttttcttctctctgggggctggatactacctcgaagaaaaaa
caagggaggccaagcattaatcaggtgtttggtgaaggagtcgattcggtaaagaaatct
ctcgaaggaatctttgacgatacagtcccggacggcaagagggaaaaagaagtggcactg
agcagcgtccatcagcacaatcctgactgtgatatttgggttcatgagtactttacgccg
tcttggttctgcctgccgaacaaccagcccgctctgacagtcatccgccccggggacacc
tctcgagatgtgctggagatgatttgcaagacacaccagctggatcactctgctcactac
ctgcgtcttaaattcctgattgaaaaccagatgcagttttatgtaccaaagcaagaggag
gatatctacgaactgctctacaaagaaatagagatctgtcagaaaattacgcagcatatt
cagatagagaagtctgacgcgtcctctgatatttatggtttctctttgtcctctgtggaa
gaagaagggattcgtcgtctgtatgtgaatggtgtcaaagagacaggcctagctttcaag
aaaggcctgaaagctggtgatgaaattgtggagattaacaagaaagctgctgaagatctg
gactcagctttgctgaaagacgtcctcattcagccttccctgtgtcttactgtgcgtacc
tatcctgagatagaggaagggcaaaaattaatgcagccaccaccacgtcgcttggaaaac
ccgtctgacttgagtgacagcacactggtgttttctggaagcaaccaagggcactcgctt
tgtggcgacccggacagctctgttgagacagcaccagaggaggcagaagtgcaggacttg
gagtcatctgatgaagccgataagatgagcaagagtacagagcaggtcgctgctttctgt
cgcagtcttcatgaaatgaacccttctgactcaagtgctcatcctcaggaattcacagga
ccccagctggccaccatgagacaactcacagatgcagataaactgcgaaaggtcatctgc
gaacttctcgaaacagagcgcacctatgtcaaagacctaaactgtctaatggagagatat
ctgaagcctctacaaaaagaaacgtttctcacaccagatgagctggatgttctcttcggg
aatctgactgaaatggtagcatttcaggtagagttcctgaaaactcttgaagatggagta
aggctggttccagacctggaaaagcttgaaaaagttgagcaatttaagaaagtgctgttt
tccttgggtggatccttcctttactacgccgaccgtttcaagctgtacagtgccttctgt
gccagccacacgaaagtcccaaaagtactggtgaaagccaagacagacactgctttcaag
gcatttctggatgctcagaatcccagacggcagcactcttccacgctggagtcttacctc
atcaaacccatccagaggatactgaaataccctctcctgctgaaggagctctttgctctg
actgatgtagacagtgaagaacattatcaccttgatgtggccataaaaacaatgaacaaa
gttgccagccatattaatgaaatgcagaaaatccatgaagaatatggggcagtgtttgac
caactcatagcagaacaaacaggagagaaaaaagaggttgcagacctttccatgggggat
ttgctcttgcataacacagtgatatggcttaatcctcctgcttcactagggaaatggaag
aaggaacctgagctggcagcatttgtgttcaaaactgctgtggtccttgtgtacaaggat
ggttccaaacagaagaagaaacttggaggatcacatagagcttcaatttatgaagactgg
gatccattccgctttcgtcacatgatacctttggaagcactgcaggttcgagcattggca
agtgcagatgcagagaccaattctgtatgtgagattgtccacgttaaatctgagtctgaa
ggcaggccagaaagaacgtttcacctttgctgtagttcaccagaacacaggaaggacttt
ctgaaggcagtgcattcgattctgcgggataagcacagaaggcagcttctcaaaaccgaa
agtttgccctcatcccagcaatatgttccttttggtggaaaaagattgtgtgctctaaaa
ggtgcaaggccagccatgaacagggcagtgtcagccccaagcaagtctcttgggaggagg
aggaggcggctggcccgaaacaggtttaccattgactcagatgccgtcttcacaagcagc
cccgaaaaagagccccagcagcccacgcacggtggggacactgaccgctgggtagaggaa
cagtttgaccttgctcagtatgaggagcaggaggacatcaaggaaacggacatcctcagc
gatgacgatgagtactgtgaggccatgaggggtgccgtggccgaccgagaccttcgggag
cggctgcaggcagcctccatcacgtgccgcggagaccgctcgcgcccggccatggacacg
cacgcctccaggatgacccagctgaagaagcaggcggccttgagcggcatcaacggtgac
gtggagggccacggcgaggaggtcatctgggtcaggcgtgaagactttgtcccgagcagg
aaactgaacacggagctctaa
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