KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128077521
Entry
128077521         CDS       T08967                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128077521 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpai03041]
    128077521 (SMNDC1)
Spliceosome [BR:tpai03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128077521 (SMNDC1)
 Complex B
    128077521 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    128077521 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 TraX-like
Other DBs
NCBI-GeneID: 128077521
NCBI-ProteinID: XP_052532784
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtccgaagacctggccaagcagctggccagctacaaggcgcagctccagcaggtggag
gcggccttgtctgggaatgccgacaacgaggacttgctgaagctaaagaaggacttacag
gaagtcatagaactgaccaaagatctcctttctacgcaaccttcagaaactcttgcaagt
tctgacagttcagcttctgctctccccagtcactcctggaaggttggggacaggtgtatg
gcaatatggagtgaagatggacagtgttatgaagctgagattgaagaaatagatgaggag
aatgggacagctgcagtcacttttgctggatatgggaatgctgaagttacaccgctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagctcagcaacgggagtataaaaagaaaaaagctttgaaaaaa
gctcagagaattaaagaactcgaacaggaacgagaggaccagaaagtcaagtggcaacag
ttcaacaacagagcatattctaaaaacaaaaaaggccaggtaaagcggagtatttttgct
tccccagagagtgtaactggcaaagttggagttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataacgtcaggcatttgatgcctcagtag

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