Tympanuchus pallidicinctus (lesser prairie-chicken): 128078442
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Entry
128078442 CDS
T08967
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpai03037
]
128078442 (IFT122)
Cilium and associated proteins [BR:
tpai03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
128078442 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
TPR_IF140-IFT172
TPR_GEMI5
WD40
TPR_IFT80_172
WD40_WDHD1_1st
WD40_CDC20-Fz
TPR_7
EIF3I
TPR_COPA_B
WD40_Prp19
Beta-prop_IFT140_2nd
Beta-prop_HPS5
TPR_12
PEP5_VPS11_N
Zf_2nd_IFT121
TPR_2
Motif
Other DBs
NCBI-GeneID:
128078442
NCBI-ProteinID:
XP_052534598
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MSNGVISIRNKNGDEKVKIERAGAASSPIWSICWNPSRDERNDTLAVADWGQRLSFYQLS
GKQIGKDRMLNFDPCCVSYFTKGEYILLGGSDKQVSLFTKDGVRLGTIGEQSSWVWTCKA
KPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKGRE
LVKKIAIYKNRLAIQMPEKILIYELYSDDSSDMYYRVKEKIVKKFECNLLVVCSDHIILC
QEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNVFAIV
LLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLC
FSGGGYLNIKAGNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKM
FKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRIRDLRYLELISSIEERKKHGE
NLTELFLADVYAYQGKFHEAAKLYKKSGHESLALDMYSDLRMFDYAKDFLRSGDPKDTKM
LIKKQADWAKNINEPKAAVEMYLSAGEHMKAIEISGDHGWVDVLIEIARKLDKAEREPLS
KCAFYFKKLNNPGYAAETYMKVGDLKALVSLHVETHRWEEAFALSEKHPEFKDEVYVPYA
QWLAENDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVLESRFNDAAYYYWMLSMQCLDIA
QENEDQKTEMLQKFHHFQQLAEVYHVYHYIQRYTEEPFSFHLPETLFNISRFLLHSLTKE
TPLGISKINTLFTLAKQSKALGAYKLARHAYDKLQGLQIPARFQKSVELGSLTIRSKPFH
DSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAV
SLIDLEAPRLSKSGNKWQEMMSDDAQSLRLNDSAVITEDDDPFTAKLSFEQGGSEFVPVV
VNRAVLRSMSRRDVLIKRWPRPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLVLQHN
CCPFCRRRIDESNQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggagtcatcagcatacggaataaaaatggtgatgagaaggtgaagatagag
cgtgccggggctgcctcgtctccaatatggtccatttgttggaatccatccagagatgaa
cgcaacgacactttagctgtggcagactggggtcaaaggctttccttttatcagctaagt
ggcaaacagattgggaaggacaggatgctcaattttgacccttgctgtgtcagctatttt
acgaagggagagtacattttgctgggaggctcagataaacaagtttccctcttcacaaag
gatggtgtccgtcttggaaccataggagagcaaagcagctgggtgtggacttgcaaagct
aaaccagactccaactatgtggcagtgggctgccaggacggcaccatctccttctatcag
ctgattttcagcactgttcacggcctgtacaaagatcgctatgcttacagagacagcatg
actgacgtgatcgtccagcacctcatcacggagcagaaagttagaataaaaggcagagag
ctggtgaagaaaatcgccatctacaagaacagattagccatccaaatgccagagaagatc
ctgatttatgagctgtattcggatgattcctcagacatgtattatcgtgtgaaggaaaag
atagtaaagaaatttgaatgcaacttgctggttgtatgctcagatcacattattttatgc
caggagaaaaggttgcagtgcctctcatttagtggtgttaaagaacgagagtggctgatg
gagtctcttatccgttacatcaaagtaattggaggacccccggggagagaaggcctcttg
gttggtctaaagaacgggcagattctgaagatatttgttgataatgtctttgccatcgtc
ctgctgaagcaatccacagctgtgcgctgtctggatatgagcgcatcccgcaacaagctg
gcagtggttgatgagaacgacacctgcctggtgtatgatattcataccaaagagctgttg
ttccaggaacccaatgctaatagcgtggcttggaatactcagtgtgaggatatgctttgc
ttttctggagggggttacctcaatatcaaagctggtaatttccctgtccatcagcaaaaa
cttcaaggctttgttgtgggatacaacggctccaagatcttctgtcttcacgttttttct
atgtcagctgttgaagttccgcagtctgcacccatgtatcaatatctggaacggaaaatg
tttaaggaagcgtatcagatcgcgtgtttgggagtaactgatgctgactggagagaactg
gccatggaagccctggaagggctggagtttgaaacggctaaaaaggcgtttaccagaata
cgagaccttagatatttagagttgatcagcagcattgaggagcggaagaagcacggggag
aacctcacggagttgttcctggcagatgtttatgcctaccaaggaaagttccatgaggca
gcaaaactgtacaaaaagagtgggcacgaaagcctagctctggacatgtactcggacttg
cgcatgtttgactacgccaaggattttctccgatccggagaccccaaagacacaaagatg
cttataaaaaaacaagcagattgggccaagaacattaatgagccaaaagcagctgtggag
atgtacctttctgcaggcgagcacatgaaggccatagagatcagtggggaccacggctgg
gtcgatgtgttaatagaaattgctcggaaactggataaagctgagcgtgagcctctgtca
aaatgtgccttctattttaagaagctcaataaccccggctatgcagcagaaacctacatg
aaggttggtgacctgaaagcgttggtctctctccacgtggagacgcaccgctgggaagag
gcatttgctttgagtgaaaagcatcctgaattcaaagatgaggtctatgtcccttatgct
cagtggctagcagagaatgatagatttgaagaagcccaaaaagcattccacaaggctggc
aggcagagagaagctgtgagagtgctggagcagctaacgcacaatgctgtgcttgaaagc
cgatttaacgacgcagcctattattattggatgctttccatgcagtgtttagatatagcc
caagagaatgaagatcagaagactgaaatgttgcagaagtttcatcacttccagcaattg
gccgaagtgtaccacgtctatcactatattcaaagatatactgaggagcctttcagtttc
cacttgcctgaaacactcttcaatatttccaggtttctgcttcacagcttaacaaaggag
actcccttggggatctcaaaaattaatacattatttaccctggcaaaacaaagtaaagct
ctgggtgcgtataaactggcgcgtcatgcctacgacaagttacagggactgcagatccca
gctaggttccagaaatccgtggagctgggcagcctgaccatccgatccaagccattccat
gacagcgaagagcttgtgcccttgtgctacaggtgctctaccaacaaccctttgctaaat
aacttagggaatgtctgcattaactgcagacagcctttcgtcttctccgcctcttcctat
gaagtgctgcatctggttgagttctatttggaagatggtatcacagatgaagaagctgta
tctctcattgatcttgaagctccaagattgagtaaaagcgggaataaatggcaagagatg
atgagtgatgatgcacagagcctgaggcttaatgacagcgcagttattactgaagacgat
gatccctttactgcaaagctgagctttgagcagggcggctcagagtttgttcctgtggtt
gtgaaccgtgccgttctgcggtcgatgagtcggagggacgtgctgattaaacgctggccc
aggccgctgcgatggcagtactaccggtccctgctgcccgacgcctccattaccatgtgc
ccgtcgtgctttcagatgtttcacacagaagactatgagcttcttgtactccagcataac
tgttgtccattctgtcgaaggagaatagatgagtcaaaccaatga
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integrated database retrieval system
