Tympanuchus pallidicinctus (lesser prairie-chicken): 128081597
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Entry
128081597 CDS
T08967
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
tpai04510
Focal adhesion
tpai04518
Integrin signaling
tpai04519
Cadherin signaling
tpai04540
Gap junction
tpai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128081597 (PDGFRB)
04020 Calcium signaling pathway
128081597 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
128081597 (PDGFRB)
04519 Cadherin signaling
128081597 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128081597 (PDGFRB)
04540 Gap junction
128081597 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128081597 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tpai01001
]
128081597 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tpai04090
]
128081597 (PDGFRB)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128081597 (PDGFRB)
Protein kinases [BR:
tpai01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128081597 (PDGFRB)
CD molecules [BR:
tpai04090
]
Proteins
128081597 (PDGFRB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
V-set
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
128081597
NCBI-ProteinID:
XP_052540917
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MLCPSLKASLQLLILTGLLEVTSGGSGLHIEPEDAELVLRLHSTFSLVCYGDSALVWERD
GQPLAALLEHRDGVFVSNLTLKNVTGRHTGEYACFYSPDQASERAERKALYIYVPDPSLV
FLPAITSEEFFIFITGYTEAIIPCRVTNPELQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYYCQAIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHDIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
IMVQVIERGFVRFHTHLASTVYAEVHKSHIIQVDVEAYPQPNIVWLKNNKTLTMESSSEF
TITNRNLSETRYQTSLVLVRVKQEEGGYYTIRASNEDDAQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSNIKRCGNQGQPTQLLGNNSAEIGLHTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGSNSQDITLVPNALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTIKEDHV
QSHLSLSVESDGGYMDMSKDESLDYVPMSDMKGEIKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARLPPSSPTLYTAVHQNGGENDYIIPL
PDPKPEAICDLPQEASISRASSILNEANTSSTISCDSPLGPQQDEQPECDLQLGCQELAP
GHQEVEESFL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtccctctctgaaggcatcactgcagctcctcatcctcactggtctgctggag
gtaacgtctgggggcagcgggctgcacatcgaacctgaagatgctgagctcgtccttagg
ctccacagcaccttctccctcgtgtgctatggggacagtgcgctagtgtgggagcgggat
ggtcagcctctcgctgccttgctggagcacagggacggggtgttcgtcagcaacctcacc
ctgaagaacgtgacaggccgtcacacaggggagtatgcatgcttctacagccctgaccag
gcttcagagcgagcagagaggaaagccctttacatctatgttccagatccctccttagtt
tttctccccgcaatcacttctgaagagttcttcatcttcatcacgggctacacagaggcc
atcatcccatgccgtgtgaccaacccagagctgcaggtgaccctttatgaaaagaaagtg
gagaatcccattccagctgcttatgacccacagcagggcttcaaaggtttctttgaggac
aagacctactactgccaagcaatcgtggatgaccaagaggtggattcagacaccttctat
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcggtgcagaccgtggtg
cgtcagggagaaaatgttaccctgatgtgcactgtcagcggcaatgagctggtcaacttc
aactgggattatccacgcaagcaggctgggaaagctgtggagccagtgaccgacttcctg
cctggatccacccatgacatccgttccatcctcatcatccagaatgcagagctagaggac
agcgggacctatgtctgcaatgtctctgagggctaccatgagaaaacagaccgcaaagac
atcatggtccaagtgattgagcgtggctttgtgcgcttccacacccacctggccagcaca
gtgtatgctgaggtccacaagagccacatcatccaggtggatgtggaagcctacccacag
ccaaacattgtgtggctgaagaacaacaagacgttgaccatggagagcagcagcgagttc
accatcaccaacaggaacctgtcagaaaccaggtaccagacgtctctggtcctggtgcgg
gtgaagcaggaggaaggaggatattacaccatccgagcttccaatgaggacgatgcacaa
gagctgtcctttcatctgcaaataaatgtgccagccaaagtggtggatctcaaggaaaac
agcagtgccagcagcggggagcagactgtaacatgctctgctgaagggatgccccagcca
gagatcagctggtccacttgcagcaacatcaaacggtgtggcaaccaggggcagcccacc
cagctgctggggaacaactctgcagagattggcctgcacaccaacgccacgtaccatgca
gagctgcaggtgtaccgcgtgaacagcaccctgcagctgcacagggtggatgaacccctg
ctcctgagatgcactgtgcaaaacttcctgggctccaactcccaagacatcactctggtc
ccaaatgccttgccattcaaagtggtcatcatctccgtcatcctggctctgctggtcctc
actgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgctatgaaatc
cgctggaaggtgatcgagtcagtgagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctctggtgcctttggacgtgtggtggaggcaacggcgcatggcctgagccat
tcacagtccaccatgaaagttgcagtcaagatgctcaagtccactgcccggagcagtgag
aagcaagccctcatgtctgagctgaagatcatgagccacctgggacctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcactgagtactgc
cgttacggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctat
ggcgagaaggcccgccgggaggcagagctgtatgggaacaccatcaaggaggaccatgtg
cagagtcacctttccttgtctgttgagagcgatgggggctacatggacatgagcaaggat
gagtctctggattatgtgcccatgtctgacatgaagggtgaaatcaagtacgctgacatc
gagtcctctaactacggcaccccatacgagctggacagctattccccatcagctcctgaa
agaacagaccgggtgacactgataaatgaatctccacttctcagctacatggacttggtg
ggcttcagcttccaagtggccaatgggatggagttcctggcttccaaaaattgtgtgcat
cgtgacctggctgccaggaacgtcctcatctgcgagggaaagctggtgaagatctgtgac
tttggtctggcaagagacatcatgagggattccaactacatctccaaaggaagtaccttc
ttgccccttaagtggatggctcctgagagcatcttcaacaacctctacaccaccctaagt
gatgtgtggtcctttgggattcttctctgggagatattcactctaggagggactccctac
cctgaactgcctatgaatgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aaacccacccatgcttctgatgaaatctacgatattatgcagaagtgctgggaggagaag
tttgagatcagaccgtccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgttcgcacaagacccaccatccctgggctgaacaacgccaggctccctcccagctcc
ccaaccctctacacggctgtgcaccagaacgggggagagaacgactacatcatccctctt
cctgaccccaagcctgaggcaatctgtgacctccctcaggaggcctccatcagccgggcc
agctctattctgaatgaagccaacacatcatctacaatatcctgtgacagccccctgggc
ccccagcaggacgagcagccggaatgtgacctgcagctgggctgccaggagctggccccg
gggcaccaggaggtggaggagagcttcctgtag
DBGET
integrated database retrieval system
