Tympanuchus pallidicinctus (lesser prairie-chicken): 128085005
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Entry
128085005 CDS
T08967
Symbol
PHC2
Name
(RefSeq) polyhomeotic-like protein 2
KO
K11457
polyhomeotic-like protein 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128085005 (PHC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128085005 (PHC2)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
128085005 (PHC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
128085005
NCBI-ProteinID:
XP_052547787
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MENEQLPAPPPSSSAGSTGTTPSSAGTTRPAAPQISVYSGIPDRQTVQVIQQALHRQPNT
AAQYLQQMYAAQQQHLMLQTAALQQQHLTSAQLQSLAAVQQASLAANRQSGSSGSNGTQQ
APVQQPTINLATSPAAAQLLNRAQSVNPGASGIAQQAVLLGNAASPALTASQAQMYLRAQ
MLIFTPTGPVSAVRPESPAPVPPPAPPPAPPPATPQVHSLALRPAGPHLPALAMKPPGSA
PRAGPPRVPPPENPADHLKKAEGPDARTHPMARTATAPAAAHPLVTPAYAPLQQPQFLQQ
PPKPMQQQFVIQQQQQQQQQQQLAPRGQPPPGPAAPQLQSLPPASPSPAPPPKTGAPHGT
GAEGTAPNGHPGCYGAPRKFQHASAVILQLQPASSTPPLGAAEAARRDAPPAARSPPATA
PPAAAAAPPPPPGPEAPQGESAAAHEPGAERVDAPPAAPAPGMTSGSGSAASTVAGAAPH
NGENKPPQAVVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGGLKPQYAQELLAERAPQH
DNTTTTDSEMEEPYLQVSKEEGAPPKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGC
TKRVGLFHPDRNKLQKPGGPPHSRRRTCKVPTLSKDTKKQTPVSLPPGSGPLSVTASLQL
NHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQAERDLELHDMELRDMELPDMHVRELA
GIGHRFLPSEPSKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSTMNI
KLGPALKIYARISMLKDS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagcagctcccagcacctccgccctccagcagcgccggcagcaccggcaca
acgcccagcagcgccggcaccacgcgcccagccgcaccgcagatctctgtctacagcggc
attcctgaccgccagaccgtccaggtgatccagcaggccctgcaccggcagcccaacacg
gcagcgcagtacctgcagcagatgtatgctgcgcagcagcagcacctgatgctgcagacg
gccgcgctgcagcagcagcacctcaccagcgcccagctccagagcctggcggccgtgcag
caggccagcctggcagccaacaggcagagcggctcctctggcagcaacggcacgcagcag
gcacctgtgcagcagcccacgatcaacctggccacctcgccagcagcagcccagctcctg
aaccgggcacagagcgtcaaccccggagcgtcaggcatcgcgcagcaagctgtcctgctg
ggcaacgccgcctcacctgccctcacagccagccaggcacagatgtacctgcgggcacag
atgctcatcttcacgcccacgggccccgtcagcgccgtccggcccgagagccctgcacct
gtcccaccgccagccccaccacccgccccaccgcccgccaccccccaggtgcacagcctg
gcgctgcgccccgccggcccccacctccctgccctcgccatgaaaccccctggcagcgct
ccacgggccggacccccccgggttcccccacccgagaaccctgctgaccacctcaaaaag
gctgagggccccgatgcccgcacccaccccatggcccgcactgccactgcccctgctgcc
gcccacccgctcgtcaccccagcctacgccccgctgcagcagccccagttcctgcagcaa
ccaccgaagccgatgcagcagcagtttgtcatccagcagcagcagcagcagcagcagcag
caacagctggcaccccgcgggcagccccccccgggtccagctgccccccagctccagtca
ctgccccctgccagccccagcccagcccccccacccaaaacgggagccccccacgggacg
ggggcggaaggcacagcccccaacgggcaccccggctgctatggggcaccccgcaagttc
cagcacgcctccgccgtcatcctgcagctgcagcccgccagcagcacgccgccgctgggt
gccgcagaggccgcccgccgggacgcgccgcccgccgccagaagcccccccgccaccgcg
cctcccgccgccgccgccgcccccccgccgccccccggccccgaagcgccgcagggggag
agcgccgccgcgcacgagccgggcgcggagcgcgtggatgcgccgcccgccgcccccgcc
cccggcatgacctcgggcagcggcagcgctgcctccaccgtcgccggcgccgccccgcac
aatggtgagaacaaaccgccgcaggccgtggtgaagccgcagatcctcacgcacgtgatc
gagggcttcgtcatccaggagggcgccgagcccttcccggtgggccgctcctcgctgctg
gtggggggcctgaagccgcagtatgcacaagagctgctggcagagcgcgccccgcagcac
gacaacaccacaaccaccgactctgagatggaggagccctacctgcaagtgtccaaagag
gagggggctcccccgaagctgaagtgtgagctgtgcggccgcgtcgacttcgcctacaag
ttcaagcgctccaagcgtttctgctccatggcgtgtgccaagaggtacaacgtgggttgc
acgaagcgcgtggggctgttccaccccgaccgcaacaagctgcagaagccgggagggccc
ccccacagccgccgccgcacctgcaaagtgcccacgctcagcaaggacaccaagaagcag
acgccggtgtccctcccgccgggctcggggccgctctcggtgacggcgtcgctgcagctc
aaccacagccaggaggactcgagccgctgctcggacaactcgagctacgaggagccgctg
tcgcccatctcggccagctcgtccacctcccgccggcgccaggctgagcgtgacctggag
ctgcacgacatggagctgcgtgacatggagctgcccgatatgcacgtgcgggagctggcg
ggcatcgggcaccgcttcctgcccagcgagcccagcaagtggaacgtggaggatgtctac
gagttcatccgctcgctgccgggctgccaggagatcgcagaggagttccgtgcccaggag
atcgacgggcaggcgctgctgctgctgaaggaggatcatctgatgagcaccatgaacatc
aaactggggccagccctcaagatctacgcccgtatcagcatgctcaaggactcctag
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