Tympanuchus pallidicinctus (lesser prairie-chicken): 128085633
Help
Entry
128085633 CDS
T08967
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04120
Ubiquitin mediated proteolysis
tpai04140
Autophagy - animal
tpai04144
Endocytosis
tpai04620
Toll-like receptor signaling pathway
tpai04621
NOD-like receptor signaling pathway
tpai04622
RIG-I-like receptor signaling pathway
tpai05132
Salmonella infection
tpai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128085633 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128085633 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128085633 (TRAF6)
04140 Autophagy - animal
128085633 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128085633 (TRAF6)
04621 NOD-like receptor signaling pathway
128085633 (TRAF6)
04622 RIG-I-like receptor signaling pathway
128085633 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128085633 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
128085633 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128085633 (TRAF6)
04121 Ubiquitin system [BR:
tpai04121
]
128085633 (TRAF6)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128085633 (TRAF6)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128085633 (TRAF6)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128085633 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
Med21
PspA_IM30
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
Sina_ZnF
UPF0242
HAP1_N
DUF4455
Spc29
U-box
CENP-F_leu_zip
DUF1664
zf-U1
HMMR_N
PUMA_CC
DUF16
ADIP
Motif
Other DBs
NCBI-GeneID:
128085633
NCBI-ProteinID:
XP_052549276
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLHSDSSCGARDMDGGCCAAMASACSGGAKEDSVSVGSGTGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCCMKMELRHLEEHQLHCDFTAVECPQCQGAFQKNHLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNISVTATNPVPFINGLPFEPAL
FSHVSHAPYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctacacagtgacagcagctgtggggcccgagacatggatggcggctgctgt
gcggccatggccagcgcctgcagcgggggagcgaaagaagacagcgtgagcgtcggcagt
gggaccggcaacccgcccagctccttcacggaggagacgcagggatacgacgtggagttc
gatccgcccttggaaagcaaatatgagtgtccgatctgcctgatggcccttcgggaagca
gtgcagacgccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcgggtcacaaatgtccagtagacaacgaaattctacttgaaaatcaactttttccagac
aactttgcaaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgctgc
atgaagatggagctgagacatttagaggagcaccagttgcattgtgatttcacggctgtg
gaatgtccacagtgccaaggagcctttcagaagaaccacctgaaagagcacatgacacag
gagtgtccccggcgacaagtgtgctgtccaaactgtgccacatctatggcttatgaagat
aaggagcttcatgaccaaacctgccctcttgccaatgtattctgtgaatattgcaacaca
atgctcatcaggcagcagatgcccaaccattacgataatgattgtcctactgccccagta
ccatgcttttacagtgcctttgggtgtcctgaaaagatgcagaggaacgaactggcacga
cacatgcaagaattcactcaggttcacatgagaatgatggctcagagcattcaaaatatc
agtgttactgctacaaaccccgtaccctttatcaacggcctaccgtttgagcctgccctc
ttctcccatgtgtcacatgcaccatataattgtaatccagaagttgaaaactttaaagaa
actattcagcaattggaaggtcgtctagtgagacaagatcaccaaatcagagaactcatt
gccaagatggagacgcagaacactcacatggcagaactcaaacgtaccatccgaaatttg
gaggggaagattactgaaatggaggcacaacaatgtaatggtatttacatctggaagatc
gagaacttcagtggacttcagaaagcccaggaagaagagaggcctgttgtgatgcacagt
cccggcttctacactggaaaacctggctacaagctgtgtttgcgcctgcatatccagtta
ccaaatgctcagcggtgtgctaattttatatctctgtttgtccacacgatgcaaggggaa
tatgacagccatctgccttggcctttccaaggcactattcgactttctattttggatcaa
tcggaaggccccgagaggcagaatcatgaagaagtaatggaagccaagccagagttactc
gccttccagagaccaacgattcatcgcaatccaaaaggttttggttacgtgactttcatg
cacctgcaaactttgaagcaaagaacctttgtgaaggatgatacccttctggtgcgctgt
gaagttctaacacgtctagatttgaacagccttcgcagggaaggatttcaagctcgcagt
actgatggagctgcgtaa
DBGET
integrated database retrieval system
