Tympanuchus pallidicinctus (lesser prairie-chicken): 128088042
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Entry
128088042 CDS
T08967
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128088042 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128088042 (AP4B1)
Membrane trafficking [BR:
tpai04131
]
Endosome - Golgi transport
Others
AP-4 complex
128088042 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT
HEAT_2
HEAT_MROH2B_C
PDS5
AP5B1_middle
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
128088042
NCBI-ProteinID:
XP_052554104
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MPYLGGEEVLRDLRRALSNPHVQAEPLRYRAAVLRVIRLMTQGADVSGLFAEMVKAGAAA
DVVQKKLVQLYVCAHAPRMPRLALLAVNTLRRDCADPSPAVRGLALRGLCDLRLPGMQEY
VQQPLLNGLRDRASYVRRIAVLGCAKVHRLQGDTEVDGALVNELYSLLRDQDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLAFLLRYRPRTEEELFNILNLL
DGYLKSSSPSVVMAATKLFLVLAKEYPHVQADVLVRVKGPLLAACTSESRELCFTALCHV
RQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVS
VELAQGAISAIGSIARTYTEQCVGILTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVC
QALPGCEDIIQDSEGKQALIWLLGAHGEKVPNAPYVLEDLVENVKTEVFPAVKMELLTAL
VRLFLSRPAECQDMLGRLLYHCIEEEKDMSVRDRGLFYYRLLQSGVDEVKRVLCSPKSDP
SLGLLEDQTEQPVNTWASEFNTLAPIYGKARWALVTAHQPGEPCYAFSPCTDSGNGGTES
LISEGSKEVLKVHPDTGSLTLIPDVALTAEQFEKTWLSLDVGCQQSLPWIGTVHPDTIQT
ALHVVHIRTIAMSKAGVQPWKAYFIAQDDSGCLFLTELLLEAEDSGMQVAVKQSEAKPEA
LQAFMSVFRTAVEAVAGLRS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctgggcggcgaggaggtgctgcgcgatttgcggcgcgcgctgagcaacccg
cacgtccaggcggagccgctgcggtaccgcgccgccgtgctgcgagtcatccggctcatg
acgcagggcgcggacgtgtcggggttgtttgcggagatggtgaaggcgggcgcggcggcc
gacgtggtgcagaagaagttggtgcagctgtacgtgtgcgcgcacgccccgcgcatgccc
cgcttggcgttgctggctgtcaacacgctgcgacgggactgcgccgatcccagccctgcc
gtgcgcggcctggcgctgcgaggactctgcgacctcaggttgcccggcatgcaggaatat
gtgcagcagcccctcctgaatggccttcgggacagagcctcctacgtgcgcaggattgct
gtgctaggctgtgccaaggtgcacaggctgcaaggagacaccgaagtggacggtgcattg
gtgaatgagttgtacagcctgcttcgtgaccaggaccctattgtggtggtgaactgtctg
agggctttggaagagatcttgaagaaagagggaggagttgtcatcaacaaacctattgcc
catcatctcctcaacaggatggctgacctggatcagtgggggcaaagcgaggtgcttgcc
ttccttctgcgttacagaccccgcactgaggaggagctgttcaacattctcaatctgctg
gatgggtatctgaaaagcagcagccccagcgttgtgatggcagccaccaagctcttcctc
gtgctggccaaggagtacccacacgtgcaggcagatgttttggtgagggtgaaggggcca
ctgctggctgcctgcacctcggagagcagggagctctgcttcactgcgctgtgccacgtg
cgtcagatcctcgggagtcttcctggccattttagcagccactacaaaaagttcttctgc
tcgtattcagaaccccattacatcaaatgccagaagatggaagtgttgtgcgagctggtg
aatgatgagaatgtgcaacaagtgctggaagagctgaagggctattgcactgatgtatca
gtggagctggcccagggggcgatctctgccataggcagtattgctaggacatacacagaa
cagtgcgtggggattctgacagagctcttggggcttcaacaggagcacatcacgtcagct
gtagtacaggcttttcgggacctggtttggctgtgtccccagtgcacagatgcagtgtgt
caggcactgcctggctgtgaggacatcatccaggacagtgaggggaagcaagcactgatc
tggctccttggtgcacatggtgagaaagttccaaacgccccctatgtgttagaggacttg
gtggagaatgtgaaaacagaggtgttcccagcagtgaagatggagctcctgacagcgttg
gtgcgacttttcctgtctcgtcctgctgagtgtcaggacatgctggggaggctgctctat
cactgcatagaggaggagaaagatatgtcagtacgagaccgtgggctgttctactatcgc
ctcttacagtccggtgtggatgaagtgaaacgggttctgtgcagccccaagtcagaccct
tccctggggctcctggaggaccaaacagaacaacctgtgaatacgtgggcatctgagttc
aacaccctcgcacctatttatggcaaagcacgttgggcacttgtcactgctcaccagcca
ggggagccctgttacgctttttctccttgtacagactctgggaacgggggcacagagtca
ctgatttctgaagggagtaaggaagtcctcaaggttcatcctgatacaggcagccttacc
ttaattcctgatgtcgccctgactgcagaacagtttgagaagacctggctgagcctggat
gttggctgccagcagtctctgccctggattggaacagttcatccagatactatccagact
gctcttcacgtcgtccacatccggaccattgctatgagcaaagctggtgtccagccatgg
aaagcttatttcattgctcaggatgacagtggttgcctcttcctgacagagctattgctc
gaggcagaagattcagggatgcaggttgcagtgaagcagagtgaggcaaagcctgaggca
ctgcaggccttcatgtctgtgttcaggactgctgtggaggcagttgctgggctcagatcc
tga
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