Tympanuchus pallidicinctus (lesser prairie-chicken): 128089441
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Entry
128089441 CDS
T08967
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128089441 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128089441 (C9orf72)
Membrane trafficking [BR:
tpai04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128089441 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
128089441
NCBI-ProteinID:
XP_052556843
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTEISMNGESPLLAATFAYWDNILGPRVRHIWAPKTDQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDPIIHTDESF
TPDLNVFQDILHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYISVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttgtgtccaccaccatctcctgcagttgctaaaacagagatctctatgaat
ggcgagtcacctttattagctgccacttttgcttactgggacaatatccttggcccccga
gtacggcacatctgggccccaaagacagatcaggtacttctcagtgacggtgaaataact
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcggaaagtggtgcaata
gatgtgaagttctttgtcttggcagaaaaaagggtaattattgtgtcattaatctttgat
ggaaactggaatggagacagaagcacatacggactatcgattatacttccacaaagtgaa
ctttccttctacctgcctcttcacagagtatgtgtggatagattaacacatattataagg
aaaggaagaatatggatgcataaggagaggcaagagcatttccagaagattgtcttggaa
ggcacggagagaatggaggatcagggccagagcatcattccaatgctaacaggagaagtt
attcctgtgatggagctcctttcatctatgaaatcacacagtgttccggaagaaatagat
atcagtgacacagtactgaacgatgatgacattggggatagctgtcatgaaggctttctc
ctcaatgcaattagttcacatctgcagacctgtggttgttctgtagttgtaggaagcagc
gcagaaaaagttaataagattgtgagaacgctgtgcctgttccttaccccgtcagagcgg
aaatgttccagactctgtagaagtgagtcttctttcaagtacgagtcagggctttttgtt
caaggtttactcaaagatgcaacaggaagctttgtgctgcccttccgtcaagtaatgtat
gctccataccctactacacacatagatgtagatgtcaatacagtgaagcagatgccccct
tgtcatgaacacatctacaaccaacgacggtatatgaggtctgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcctattatccacacagatgagagcttc
acaccggatttgaatgtttttcaagatatcctgcatcgagacacattagtaaaagccttc
ctggatcagatctttcatctgaaacctggcttgtctctaaggagtacattccttgctcag
ttcctgctagtccttcatagaaaagctttaactttaataaaatacatagaggatgacacg
cagaaaggaaaaaaaccttttaaatctcttcgtagcttaaagatagatctcgacctaaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaacctggtctgcat
tccttcatctttgggaggccattctacatcagcgtgcaagagcgtgatatgctaatgacc
ttttaa
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integrated database retrieval system
