Tympanuchus pallidicinctus (lesser prairie-chicken): 128089877
Help
Entry
128089877 CDS
T08967
Symbol
ATN1
Name
(RefSeq) atrophin-1 isoform X1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128089877 (ATN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
128089877
NCBI-ProteinID:
XP_052557676
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MFSSSRAKENGGPTPKRMKTRQNKDSMSMRSGRKKETPGPREELRSRGRASPSGVSTSSS
DGKAEKSRQATKKGRVEESCTPKGSKQSRTEEISESEGEDSNAPKKTKTEELPCPPSPSD
VDSLDGHSFNDEMSSDPRDIDQDNRSTSPSVYSPGSVENDSDSSSVLSQGPSLSYHHPPL
FPQSPPVAPTSDSLARPPEPGFSLPGEAHPQGPTGGGYHSQLEGQASRIFQAPAPQTPAS
SSSAVATTSAPCSSSSSSSSTSTHAPLYPAANVVQVGSKIAGGAGGLSAPGSREQTLSAK
HNPPPTTPISLASVVGGLPPQKTSPANPPPAPPASAPSFPHVSANLPPPPALRPLNNVAA
ASSSPGMAGQALSGHMASPHGIGQDKAQPLAPSRYPYAPPQLPPSSSSSQYPQPSPTQPL
PSYTASYGHSFPPPSGLSVSSQPPKYTQPSLPSQPVWSQAPPPYSRPLGNASSHLPASFP
GQSPHHQQPPQQHHHGHSSGGGVSPAVAAAPPQPPGGYPHALESNSHHPSHATYGLRLYP
PHSQATYSQAPSAATAPSSSSSCSSSSSSSSSSTSSQGSYPSICTHPPGQSPATYTFPPP
PPPSPAHGAGPPVTSAATTLSTVITTMASPSAAPYKTVSPPMPPSAVAPYGKCAASPVPT
FQPPAPYKPSSPPASSAAPFRAATPPGYRVASSPVASGYKAASPTPPAPPLPGSLATPAP
PLPLSAAQIKQEPSEEYEPPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSC
SRTDLYFVPLDGSKLAKKRADLVEKVRREAEQKAREEKEREREREREKEREREKERELER
SVKMAQEGRPVECSSLGPVPHRPSFEQGSAVATVPPYLGPDTPALRTLSEYARPHVMSPS
NRNHPFYVPLGAIDPGLLGYNVPAIYSSDPATRERELREREARERDLRDRDLRERLKPGF
EVKPAELEQLHAVPAAAMDPFPRHGGLSLQTAPGLHPAFPFHPGLGHLERERLALAAGPT
LRPDMSYAERLAAERQHAERVAALSNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIH
AASASVHPLIDPLASGSHLTRIPYPAGTIPNPLLPHPLHENEVLRHQLFAAPYRDLPGSL
SAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHGVPLPTQEDYYSHLKKESDKPL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcaagccgtgccaaggagaatgggggtcccacacccaaaagaatgaagaca
cgacagaacaaggactcgatgtctatgcggagtggacggaagaaagagactccggggccc
cgagaggagctcaggtcacggggtcgagcttcccccagtggtgtaagcacctccagcagt
gatggcaaagctgagaaatcccgacaagcaacaaagaaaggccgggtggaggaatcctgc
acccccaagggcagcaagcagagccgaacagaagagatctctgaaagtgagggggaggac
agcaatgctcctaaaaagaccaaaactgaggaattaccctgtcctccatccccttctgac
gttgacagcctcgatggccacagcttcaatgatgagatgagcagcgacccacgggacatt
gaccaggataacaggagcacctcacccagtgtctacagccctggcagtgtggagaatgac
tccgactcctcctctgtgctgtcccagggcccatccctctcctaccaccaccctccgctc
ttcccccagagccctccggtcgcccccacttctgacagcctggcccgtccacctgagcct
ggtttcagtctcccaggcgaggcccacccccagggccccactggtggaggctaccactcc
cagctggagggccaggcctcccgcattttccaggctccagccccacagacaccagcctcc
tcttcttctgccgttgccaccacttctgccccctgctcttcttcctcctcctcttcttcc
acttccacccacgctcctctctaccctgcggccaatgtggttcaagttggttccaaaatt
gctggtggagcaggggggctctcagcaccggggagtcgtgagcagaccctcagcgccaag
cacaatccaccacccaccactcccatctcactggcgtcggtggttggggggttgccccct
cagaagacttccccagccaacccaccgcctgctcccccagcctctgcaccttccttcccg
catgtctcagccaacctgccacccccaccagccctacgcccactgaacaatgtggcagct
gcctccagctccccagggatggcagggcaggccttgagtgggcacatggcatcaccccat
gggataggccaggacaaggcacagcccctggccccctcacgctacccctatgcccctccg
cagctgccaccctccagttcctcttcccagtacccacagccctcccccacccagcccttg
cccagttacactgcctcctatgggcactcctttcccccgcccagcggcctttcagtgtcc
agccagccccccaagtacacccagccctccctaccctcacaacctgtgtggagccaggcc
cctcctccctacagccgccccctgggcaatgccagctcgcatctcccagcctccttccct
ggtcagtctcctcatcaccagcaaccaccgcagcagcaccaccatggccacagcagtggt
gggggggtctccccagctgtagcagcagcccccccacaaccccctgggggctatccccat
gccctggagtccaatagccatcacccatctcatgccacatatgggttgcgcctctaccct
ccccacagccaggccacttacagccaggctccctcagctgctacagccccttcttcctcc
tcctcctgttcctcctcatcttcttcttcctcctcctccacctcttcccagggaagctac
ccttccatatgcactcatcccccagggcagagtcctgccacctacaccttccccccgcct
ccacccccctccccggcccatggtgctggccctccagtcacctctgcagccaccaccctc
tctaccgtcatcaccaccatggcctctccatctgcggccccctacaagaccgtctcgccc
ccaatgcctccctcagctgtggccccatatgggaaatgtgcagcctcccctgtccccacc
ttccagcccccagctccctacaagccaagctctcctccagcttcctcggctgctccattc
cgggctgcaacccccccaggctaccgggtagcatcctctcctgtggccagtggctacaag
gccgcctcacccaccccgcctgccccaccgctgccagggagcttagccaccccagcccca
ccactgccgctcagcgcagcccagatcaagcaggaaccatcagaggagtatgagccccca
gagagccctgtgccacccgctcgcagcccctcaccgccacccaaggtagtggatgtgcca
agccatgccagccagtcagccaggttcaacaagcacctggaccgtggcttcaactcctgc
tcccgcacagacttgtacttcgtgccccttgatggctccaagctggccaagaagagggca
gacctggtggagaaagtgcggcgggaggccgagcaaaaggctcgagaggagaaggaacga
gagcgggaacgagagcgagagaaggaacgggagcgggagaaggaacgggagctggagagg
agcgtgaagatggcccaggagggccggccagtggagtgttcctcactggggcccgtcccc
catcgcccttcctttgagcagggcagcgctgtagcaaccgtgcccccctacctgggccct
gacaccccggccctgcgcacactcagtgaatacgcccggccccacgtcatgtcccccagc
aaccgcaaccaccctttctacgtgccgctgggtgccatcgacccaggcctgctgggctac
aacgtgccagccatctacagcagcgacccagccacacgggagcgggagctgagggagagg
gaagcccgtgagagagatctgagagaccgggacctgcgtgagcgcctcaagcctgggttt
gaagtcaagccggctgagctggagcagctccatgccgttccagctgctgccatggatcca
ttcccacgccatggtgggctcagcctgcagacggctcccggtctccatcccgcctttccc
ttccatcctgggctgggccacctggagagggagaggctggcgctggcagctggccccact
ctgcgtcctgacatgtcttatgctgagcgcctggcagccgagcgccagcacgccgagcgg
gtggctgctctcagcaatgacccactggcccggctgcagatgctcaatgtgacgcctcat
caccatcagcattcccacatccactcccacctacacctccaccagcaggatgccatacac
gcagcctcagcctctgtccaccctctgatcgacccccttgcctcgggatcgcacctcact
cggatcccatacccagctggcaccatccccaaccctctgctccctcaccctctccatgag
aacgaagtgctgcgccaccagctctttgctgctccctatagagacctgccaggatctctc
tctgcccccatgtcggcagcgcaccagctgcaggccatgcacgcgcagtcggccgagttg
cagcgcctggctctggagcagcagcagtggctccatgctcaccaccctctgcatggagtg
ccactccccacccaagaggattactacagtcacctgaagaaggaaagtgataaacccctt
taa
DBGET
integrated database retrieval system
