Tympanuchus pallidicinctus (lesser prairie-chicken): 128090301
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Entry
128090301 CDS
T08967
Symbol
PKP1
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128090301 (PKP1)
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128090301 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT
HEAT_EZ
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
DUF7729
Motif
Other DBs
NCBI-GeneID:
128090301
NCBI-ProteinID:
XP_052558507
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDCVADGYGYGTSRGSYYTKTQMGNSSWGYPLYNGTLKRDAENRRYSSYS
QMEGWGSKHYSKAVCSPNRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKSQVGGRAEHK
ATLNRQSIYSSCSTQQGTTRTSKKMPARALSCPSSNKPDVVYAQPMMSCKQDAVYGQAQS
GSKICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAK
LVELLRSTNQNVQRAAAGALRNLVFRNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLT
GLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGGCNRTREIIDPEVFFNATGCLR
NLSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPN
KYTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTY
LSLMDHSKKDATLEACAGALQNLTASRGLMSNAMSQLIGVKEKGLPRIARLLQSNSSEVV
RSGASLLSNMSRHPILHKTMAHQVLPDVSRLLSFQSGNTNSYGEIMTSACYTLRNLIMSN
PHLGKCYLTSNMLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMG
SLAGTTFRTLPSRF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccgctgaaaacggcgttggcatatgagtgcttccaagaccaggccagc
tccacgctggccctgccctcggatcacaagctgaaaacgaagggcacgggaaagcagcgg
gtccaggagcaggtgatgatgacggtgaagcggcagaagcagaagtcgtcggtgtcatcg
agcgtgggacactccaacagaggttccatgtacgactgtgtagctgatggttatggctac
gggacgtcccggggcagttattacaccaaaacccaaatgggaaacagcagctggggatat
ccgctgtacaacgggaccctgaagcgggatgctgagaaccggcgctacagctcctacagc
cagatggagggctggggcagcaagcactacagcaaggcagtctgcagccccaacagggcc
ggcagcgactactgctttgtgcagaacatcaagagcagccggagcgagcccgacctctac
tgcgaaccaccgcggggcacactgaggaagagtcaggtcgggggtcgggcagagcacaag
gcaaccttgaaccgccagagcatctacagcagctgtagcacccagcaaggaactaccagg
acaagtaaaaaaatgcctgcacgggccctctcctgcccctccagcaacaaacccgatgtg
gtctatgcccagcccatgatgagctgcaagcaggatgcggtttatggacaggctcagtct
ggctccaaaatatgtggtgatgagatagatggtggcacaatgaccatccagaaagccata
cagctcctgtgctcctctgatgacaaataccaggccatgggggcttattacctccagcac
acctgcttccaggatgagtctgccaaacaagaggtctatcggctcgggggaattgccaag
ctggtggagctgctgcgcagcacgaaccaaaacgtacagcgggcggcagccggagccctc
cggaatttggtcttcaggaatccaaccaacaagatagaaacccggcggcagaacgggata
agggagtgtgtgagcctcctgaggaggacggggaacaccgaaattcagaagcagctgaca
ggtctgctctggaacctctcctccactgatgaattaaaagaggagttgatacaagaggcc
ctccccgtcttgacagactgtgttatcatccctttctctggctggtccgatggtggctgc
aacaggacaagggaaattatcgaccccgaagtattcttcaatgccacagggtgcttgaga
aacctcagttctgcagacatgggacgtcagaccatgcgaaattaccctggcttgattgat
tctgtcatgacctacgcccagaactgcgtggcttctaaccgacctgatgacaagtctgtg
gagaactgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaac
aaatacacccaactcaaccacatggcccggagtgtttacatggacaaaactctcacaggc
tgcttcaacagcaggagtggcaaaatggagaatgatgagtatggtgtccctctccctgaa
gaggattttaaacccaagggacccagctggctgtaccactctgatgccatccgcacctac
ctgtccctgatggatcacagcaagaaagatgccaccctggaggcttgtgctggagccctg
cagaacctcactgcgagccgagggctgatgtccaatgccatgagccaattgattggggtg
aaggaaaaaggtttgcctcgcatcgcacggctcctgcagtccaacagctccgaagttgtc
cggtctggtgcttctttgctgagcaacatgtcccgacatcctatcctgcacaaaaccatg
gctcaccaggtgctcccagatgtatcacgtctcctgtcattccagtctggaaataccaac
agctatggcgagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaac
ccacacctgggaaagtgttacttgacaagcaacatgctcaataatgtagtaagcctgtgc
cgaaatggctcctgtccaaaagcagctgaagctgctcgcctcctcctgacagacctttgg
tcgaacagggagctccagagtgtgctcaagcagcaaggatttgataagaacatgatggga
tctttagctgggacgaccttcaggactcttccttccagattttag
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