Tympanuchus pallidicinctus (lesser prairie-chicken): 128091864
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Entry
128091864 CDS
T08967
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128091864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128091864
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tpai04054
]
128091864
Membrane trafficking [BR:
tpai04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
128091864
Pattern recognition receptors [BR:
tpai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128091864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
CARD
UPA-FIIND
PYRIN
Ribo_biogen_C
LTXXQ
Motif
Other DBs
NCBI-GeneID:
128091864
NCBI-ProteinID:
XP_052561221
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MASGGSTENTVTSLLWDTLKFLEKHDFWKFKRELSKFQPREGYERIDLESVAGLSPAALA
TLLYSHYGRSYCVEVTVDVLRVMGQVHQAKRLLDTLQTGARFVEQNKEFIIQRANNVGGT
MEELLQEGVLSSKQHDSIMAESTNQKRMQKLYELVPVWDATAKYCLYNVLRRNNLSLFLQ
YAGDGLTHYSSAFEGWIVNLDAWISNTQASFYGTVSKLREQVGKLFPFTTPARPEDKLFD
VESSSGRGSSPKCMACSSQEEDGAEEVKPEITGSKVGKKEIYRAHFPRAGFFRCTETELK
FLVRMATTIEYEYSFWESHLPAGIPSEWMEAGPVFDIRAEPRAVEAIHLPHFLCLSERKL
SVSGMHIGHLVDGNLCLENPDAVTPFHAVLRDPSFSPMGVILLSASFPFIPVHCLVLLYR
VIRAADITLHLYLIPNNHGLEKAVEKDEKRRGHSFLVDKPPHTSQPLKFNTRYRVSSPSE
AEINPQELKFIYLTSGSRQLYTEIYSKDLQEGMQLTLTKVSQEGKMEHSPLWATFLRAGD
IEPPVAFSTSLFSDPSLIEHQPSSSVQTQQKGLHFVEQHREQLIQRVTSVSPVLDQLYGR
VLTNEQYQSIRGMPTPQEQMRLLYSFMPSWDVACKDLFLDALKKTNNHLLQDLQGQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggaggcagtacagagaacacagtgacaagtctactgtgggacaccctgaag
ttcctggagaagcatgacttctggaaattcaaaagggaactcagcaagttccagcccagg
gaggggtatgagcgcattgacctggagagtgtggcagggctgtcaccagctgcacttgcc
accctgctgtacagccactacgggaggtcctactgcgtagaggtgacagtggatgtgctg
agagtcatgggacaggtgcaccaggccaaacgtctcctggacacgctgcaaacaggcgca
aggtttgttgagcagaacaaagagtttataatccagcgagccaataatgtgggagggact
atggaggaactcctccaggaaggggtgctgagctccaagcagcatgatagcatcatggcg
gagagtactaaccagaagagaatgcagaagctctatgaacttgtgccagtgtgggatgcc
acagccaaatattgtctgtacaatgtgctgaggagaaataatctctccctcttcttgcaa
tatgcaggagatggattgacccactactcctcggcatttgaaggctggatagtaaatctg
gatgcctggatatctaatacacaagcttcattctacggcacagtctcaaaactgagagag
caggtgggaaagctgtttccattcacaactcctgcacgtccagaagacaagctttttgat
gtggagagcagcagtggcagaggctcaagtcccaaatgcatggcatgctcaagtcaagag
gaggacggggcagaagaagtgaaaccagagattactgggagcaaagttggcaaaaaagag
atatacagagctcattttcctcgggctggcttcttccggtgcactgagacagagctcaag
ttcttagtgaggatggccaccacgattgagtacgagtactccttctgggaaagtcacctg
cctgcaggaatcccctctgaatggatggaggctggacccgtgtttgacatccgtgctgaa
ccacgtgctgttgaggccattcacctcccacacttcctgtgtctctcagagaggaagtta
agcgtgtctgggatgcatattggccaccttgtggatgggaacttgtgcctggagaatcct
gatgcagtgacgccattccacgcagtgctgagagaccccagcttctcacctatgggtgtc
atcttgctttcagcctcgttccccttcatacctgtgcactgccttgtgctgctctaccgt
gtcatcagggctgcagacatcacccttcatctctacctcatccccaacaatcatggcctg
gaaaaggcagtggagaaggacgagaagagacggggccattccttcctggtggacaaacct
cctcacacctcccagccactgaagtttaacacacggtaccgtgtgtccagtccctctgag
gcagagataaacccccaagagctgaaattcatctacctgacttcaggcagccgccagctc
tacaccgagatctacagcaaggacctgcaggagggaatgcagctcaccttgacaaaggtg
tcacaggagggcaaaatggagcacagccctctctgggccaccttcctgagagcaggagac
atcgagccaccagttgccttttccacatcattgttttcagatccatcactcatagagcac
cagccatcctcttctgtccagacccaacaaaaagggctgcattttgtggagcaacaccga
gagcagctgatccaacgtgtgacatcagtcagccctgtcctggaccaactctatgggcgc
gtcctgaccaatgagcagtatcagagcatccgaggaatgcccacaccgcaggagcagatg
cggctcctctacagcttcatgccaagctgggatgttgcctgcaaggatctgttccttgat
gcgctgaagaaaaccaataatcaccttctccaggacctccagggacagtga
DBGET
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