Tympanuchus pallidicinctus (lesser prairie-chicken): 128091987
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Entry
128091987 CDS
T08967
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128091987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128091987
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tpai04054
]
128091987
Membrane trafficking [BR:
tpai04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
128091987
Pattern recognition receptors [BR:
tpai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128091987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
CARD
UPA-FIIND
PYRIN
LOH1CR12
Ribo_biogen_C
Motif
Other DBs
NCBI-GeneID:
128091987
NCBI-ProteinID:
XP_052561376
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MASGGRKENAVVELLWYSLEQLGKHALTEFKAELSKIQPKEGYECIELESVTDLSPAALA
SLLYSHFGQSHCVEVTAHVLWAMGWMALASDLLDKLNQGARFVEWSSDLLIQKVYNVDGT
MKELLQEGVLSSEQHDSIMAESTNLNRMQKLYELVPAWDDTAKYCLYDVLMRNNPSIFLQ
YLADTRAESCFDEFGMKKQDTSWAGPVTYPDICLSSSVGYPGGIEEPAISESTDTNWRKL
MGNQNLLTPCAPPEREPPQMESDSGTHSGAKCMACPWPEDDRAEEVKPEITGGKEGKKET
YRAHFPRAGFFRCAETELKFLVRTATTVEYEYSFWERHLPDGIPAGWMEAGPVFDIRVTL
GAVEAVHLPHFLCLAEGNVNTSEMRIGHVVNGNLLLEKPDAVKPFHAELRDPSFSPMGVI
LLSAAFPFIPVHSLVLLYRVIRAADITLHLYLIPNNHGLEKVVDKDEKRRGHSLLVNKPP
QTKRPLNFNTWYRVSGPSQAEINPQELKFVYLTSDSRQLHTEVYNKDLQEGMQLTLMKVA
QEGEKECDPLWAAFLRAGDIEPPAASPPSYSAGLHFVEQHREQLIQRVTSVSTVLDRLYG
HVLSNEQYQSIRAVPTMQEQMRLLYSFVPSWDIACKDLFLDALKDTNSHLIQDLQGQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggaggcaggaaggagaacgcagtggtcgagctcctatggtacagcctggag
caactggggaagcatgctctcacagagttcaaggctgaactcagcaagatccagcccaag
gaggggtacgagtgcatcgagctggagagtgtgacggatctgtcgccagcagcgctcgcc
agcttgctgtacagccactttgggcagtcccactgcgtggaggtgacagcacatgtgctg
tgggccatgggatggatggctctggccagcgatctcctggacaagctgaaccagggggcg
aggtttgttgaatggagcagtgacctcctaatccagaaagtctataacgtggatgggacc
atgaaggaactcctccaggaaggtgtgctgagctctgagcagcatgacagcatcatggca
gagagcaccaacctgaatagaatgcagaagctctatgaactggtgccagcatgggacgac
acagccaaatattgcctgtatgatgtactgatgagaaataatccctccatcttcttgcaa
tatttagcagataccagggctgaatcatgctttgatgagttcgggatgaaaaaacaagat
acctcctgggccggtcctgtgacatatccagacatctgcctgtccagttctgtgggctat
ccaggtgggatagaagaaccagcaatatctgagagcacagacacaaattggagaaaactg
atgggaaatcaaaatctgctcacaccgtgtgcgcctccagaacgtgagcctccacagatg
gagagtgacagtggcacacactcaggtgccaaatgcatggcatgtccctggccagaggat
gacagggcagaagaagtgaagccagagattactggaggcaaagaaggcaagaaagagaca
tacagagctcatttccctcgggccggtttcttccgctgtgctgagacagagctcaagttc
ctggtgaggacggccaccactgttgagtatgagtactccttctgggaacgtcacctgcct
gatgggatccccgctggatggatggaggctggaccggtgttcgacatccgtgttacgctg
ggtgctgtcgaggccgttcatctccctcatttcctgtgtctcgcagagggaaatgtgaac
acgtctgagatgcgtatcggccatgtcgtcaatgggaacctgctcctggagaagcctgat
gcagtgaaaccattccatgcagagttgagggaccccagtttctcccccatgggagtcatc
ttgctttctgccgcattccccttcatccccgtgcactcccttgtgctgctctaccgtgtc
atcagggctgccgacatcacccttcacctctacctcatccccaacaaccacggcctggaa
aaggtggtggacaaggatgagaagagacgaggccattcactcttggtgaacaaacctccc
cagaccaaacgaccgctgaacttcaacacatggtaccgcgtatctggtccttcacaggca
gagataaaccctcaagagctgaaattcgtctacctgacatcagacagccgccagctccac
accgaggtctacaacaaagacctccaggagggaatgcagctcactttgatgaaggtcgcc
caggagggtgaaaaggagtgtgacccattgtgggctgccttcctgagggcaggggacatt
gagcctccagctgcctctcctccttcgtactcagcagggctgcattttgtggagcagcac
cgagagcagctgatccaacgagtgacatctgtcagcactgtcctggaccggctctacggg
cacgtcctgagcaatgagcagtaccagagcatccgagcagtgcccaccatgcaggagcag
atgcggctcctctacagcttcgtgcccagctgggacatcgcctgcaaggatctgttcctg
gacgctctgaaggataccaacagtcacctcatccaggacctccagggacagtga
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