KEGG   Thrips palmi (melon thrips): 117639582
Entry
117639582         CDS       T08251                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B isoform X1
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117639582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpal03019]
    117639582
   03041 Spliceosome [BR:tpal03041]
    117639582
   03032 DNA replication proteins [BR:tpal03032]
    117639582
Messenger RNA biogenesis [BR:tpal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     117639582
Spliceosome [BR:tpal03041]
 Complex A
  U1 snRNP components
   Sm proteins
    117639582
  U2 snRNP components
    117639582
 Complex B
  U1 snRNP components
    117639582
  U4/U6.U5 tri-snRNP components
    117639582
 Complex C
  U2 snRNP components
    117639582
DNA replication proteins [BR:tpal03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     117639582
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 117639582
NCBI-ProteinID: XP_034231292
UniProt: A0A6P8YC29
LinkDB
Position
Unknown
AA seq 217 aa
MTISKNNKMLQHINYRVRIILQDSRTLIGTFKAFDKHMNLILGDCEEFRKIKPKKKMPER
EEKRVLGFVLLRGENIVCMTVEGPPPPEEGLPRVPVPGAAPGPGMGRAAGRGVPPGAGGI
PAGLQGPVRGVGGPSAQVMAPGGRGAQVSAPPQMRPQQPGPPRMPVGGPPPGMMGPPPGM
MGMHPGMMGRGAPPMGAPPMRGMPPSMIRGGPPRPPY
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgatcagtaagaataacaagatgctccagcatatcaactatagggtccgaatcatt
ctacaggattcgagaactctcataggcacttttaaagcatttgacaagcacatgaacctg
attttgggagactgcgaagaattcaggaaaatcaagccaaagaagaagatgccagaaaga
gaagagaagagagttttaggatttgtgttactccgaggagagaatattgtctgtatgaca
gttgagggtccccctcccccagaagaaggtctccctcgagttcccgttcctggcgctgcc
ccaggccctggcatgggtcgtgctgctggacgaggcgtacctccaggtgctggcggcatt
cccgcaggtcttcaaggccctgtacgcggtgttggtggtccatcagcacaagtcatggct
ccgggtgggcgtggtgctcaagtgtcagctcctccacagatgagaccgcagcaacccggt
ccccccagaatgcctgtcggtggtccacctcctggcatgatgggcccaccccctggcatg
atgggtatgcatcctggtatgatgggacgtggtgcacctcccatgggtgcccctccaatg
cgaggaatgcctcccagtatgatcagaggaggacctccaaggccaccatattaa

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