Thrips palmi (melon thrips): 117646703
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Entry
117646703 CDS
T08251
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03440
Homologous recombination
tpal03460
Fanconi anemia pathway
tpal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117646703
09124 Replication and repair
03440 Homologous recombination
117646703
03460 Fanconi anemia pathway
117646703
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpal01009
]
117646703
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117646703
03036 Chromosome and associated proteins [BR:
tpal03036
]
117646703
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117646703
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117646703
Protein phosphatases and associated proteins [BR:
tpal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117646703
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117646703
Multi subunit type E3
BRCC complex
117646703
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117646703
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117646703
BRCA1-A complex
117646703
BRCA1-B complex
117646703
BRCA1-C complex
117646703
BRCA complex
117646703
FA (Fanconi anemia) pathway
Downstream FA components
117646703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
RTT107_BRCT_5
Prok-RING_4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
Glyco_transf_64
zf-C3H2C3
zf-C3HC4
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117646703
NCBI-ProteinID:
XP_034243714
UniProt:
A0A6P8ZP95
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MAGNEMVGGAAAVYEAMQTVLGSFKCDVCSKLQISVVTATCKHSVCQNCRPGKEKNSLCP
LCNDCISSDEKTQACATMERSSQPVLRIKGPRVLADTVKKSDKSLNSSSRRSFAKKSSSH
YIQDLRTTNAKLAHFLAAEKSKYCALARKYRENNKVHAHQQAEFRTLSRGIKSGIKFLMN
SVESMFEGIQILSEVNDKINRLWPESADTVTPQTSVADVNALCTSSSSTAPTVGDNRSVA
SQTVPPPKTNVSSPRHGTVMPMVKGQVISKPTISLRRVNVPLGLSNRNRVQLPHTRGTFV
DNIVEPNRLSIVSEEVNESRQEPANSNHMPSTSSHGSTGVAFGRLGYSAAHDDTLPLSHL
KKVCFKSPPKGKQNTTPPLDASRSSTDSNEYETESSSEDEGLALQIVESKKSFIERKRQL
DSKEGTSWNYDDAGKYLGQPPKRKKSAKNSGCSETSSSLVQPKGIQHHEDNVPTLRDRRA
KTSLEKVISPKLQKKNNLCNSQSTLSENGEAFQSPANDVMDTTNCEEMSMSFTCVTVTRL
PIVLSTNQAETSPESAQQSPQLSEQQQHSGLSGEFKRSSPSEEESSLSQNMKRMGEQSSN
ATKAKMRSAKSQKSLEGASSSSNPSSSSDPIFPHERGPEEGNQPEMEAQSSNASKPKKRS
AKPQKTSEGSHASANSSSATSDGSEHDAFIAGRDVAVNLEKTCGTVHQDRKQSQDSKLSC
GPLDVIGRSPKKTVLLEAASNDIPQVDLDDDSSSSVGPDISSKRPRPLGSFSDSSYSDVV
VSKKQKQKKKKIQVLSDNENSCSTHNDDADTSIVDTSKIMPNIEARLAEEERMQSAGWLN
EMVNTEPVSETFEDSWDVLSNTSKNQTDSDGDSEVINPTPQKQFSFTLRQTTQSDDIVPS
SQPPIPTIPSHRLVPPLLGDNHKDSIGSKPNDLPQEDLLESLGNQRNTCEDVQIVENRES
SQAPVTEDASETNLFSDPVEVTETRNGEHAEDALKTTKLQFVCSSLPKNLVAQVKKLANI
VKAEFSSKFTSDTSHLIVGVDENNRADKTLKYLCAVAAGKWVVSPAWVEKCLEAKKLLPE
EPFEALDTTGEPGPQLSRESRLSKKNLFSGFEFCCIGEFPNISRAQMQALLIDCGASIVS
KPSSFSFEERVIPVALAQWDESKEAEYKTWPGDCRAPLVHYEWVLDCIGKFSVTSFSAML
LSDVSEDYYVSMGIPSFPV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatgaaatggtgggcggggccgcggcggtgtacgaggccatgcagacagtg
ctgggtagctttaagtgtgatgtgtgctctaaattacagataagtgtcgtgacagcgact
tgcaaacattctgtctgtcaaaactgcagacctgggaaagaaaagaattctctttgccct
ttgtgcaatgattgcatctcttctgatgagaaaacacaagcttgtgccaccatggagcgg
tcctcccaacctgttttgagaatcaagggaccccgagttctagccgacacagtaaagaaa
tcagacaagagtttgaattcttcctcgcgcagaagctttgcaaagaaatcttctagtcat
tatattcaagatcttcgaaccactaatgcaaagttagcacatttccttgctgccgaaaaa
tcaaaatattgtgcccttgctaggaaatatagagaaaataataaggttcatgctcatcaa
caggctgaatttagaaccctttctaggggtattaaatctggaatcaaatttttgatgaat
tcagttgaatcaatgtttgaaggaattcagattctttcagaagtgaatgacaaaattaac
agattatggcctgaatcagcagatacagttacacctcaaacgtcagttgcagacgtaaat
gctctgtgtacgtcaagtagttcaacagcacccacagttggtgacaatcggtctgtcgca
tcacaaactgttccccctccaaagacaaatgtgtcatcaccaaggcacggtactgttatg
ccaatggtgaagggtcaagtcatatctaagccaactatttccctacgaagagttaatgtg
ccccttggattatcaaatagaaacagggtccagctgccacatactagaggcacctttgtt
gataacattgttgagccaaatcgattgagcattgtttctgaggaggtaaatgaatcaagg
caagagcctgcgaacagcaaccatatgccctcgacttcttcacatggctctacaggcgtt
gcctttggaaggttgggatactccgctgcacatgatgataccttacctctatcgcatctc
aagaaggtttgtttcaagagtccacctaaaggaaagcagaacacaacgcctcctcttgat
gcatctagaagcagtactgattctaatgagtatgaaactgaatccagttctgaggatgaa
gggctggcattgcagattgttgagtccaagaagtcgttcatagagcgaaaacgacaatta
gattccaaagagggtacttcctggaattatgatgatgctggaaaatatcttggacagcca
ccaaaaagaaagaagtctgcaaaaaattcaggatgtagtgaaacttcatcatctttggta
cagcccaaaggtattcagcaccacgaagataatgtacctactttaagagatcgaagagct
aagacttccttagagaaagttattagtcctaagttacaaaagaaaaataatttgtgtaac
agtcagtcgactctctcagaaaatggagaggctttccaatctcccgcgaatgatgtgatg
gacacaacaaattgtgaagaaatgtctatgtcttttacatgtgtcactgtaacgagatta
cctattgtcttgtctactaatcaagctgagaccagtccagaaagtgctcaacaatcaccc
caattatctgagcagcaacaacactctggtttgagtggtgagtttaagaggtcctcacca
tcagaagaagaaagcagcctttcacagaacatgaaaagaatgggggaacaatcatcaaat
gcaacaaaggcaaagatgagaagtgctaagtctcaaaaaagtttggaaggggcaagttca
agttcaaacccatcgtcctcctctgacccaatcttccctcatgaaagaggtcctgaagag
ggaaaccaaccagaaatggaggcacaatcatcaaatgcatcaaagccaaaaaaaagaagt
gcgaaacctcaaaagacctcagaaggatcacatgctagtgcaaattcatcgtccgccact
tctgatggctcagaacatgatgcattcatagccgggcgagatgtagctgttaatcttgag
aagacctgtggaacagtgcatcaagacaggaaacaatctcaagattccaaactcagttgt
ggcccactagatgtcataggaagaagtcctaagaagacagtacttttagaagctgcttca
aatgatattcctcaagtggatcttgatgatgattcaagctccagtgtcggcccagacata
agttctaaacgcccccggccattgggcagctttagtgactcgtcatactcagatgttgtt
gtgtctaaaaaacagaaacagaagaaaaagaaaattcaggtgctatctgacaacgagaat
agttgtagcactcataatgatgatgctgatactagcattgtagacacgtctaaaataatg
ccaaatattgaagcccggcttgcagaagaggaaaggatgcaatcggcagggtggttaaat
gaaatggtgaacacagaaccagtgagtgaaacatttgaagactcctgggatgttttgtcc
aacacatcaaaaaaccaaactgacagtgatggtgattctgaagtcataaaccccactcct
cagaagcaattttcatttactttgaggcaaacaactcaatcagatgatattgtcccaagt
tcgcagcctccaattcccacaattcccagccatagacttgtaccccctttacttggagac
aaccacaaagactcaataggaagcaaacctaacgacttgcctcaagaagacctgcttgag
tcactgggtaaccagagaaatacttgtgaggatgttcaaatagtggaaaaccgtgagtct
tcccaagcaccagtgactgaagatgcctctgagacaaaccttttctctgatcccgtagaa
gttacagagaccagaaacggagagcatgcagaagatgcacttaaaaccactaagcttcaa
tttgtctgtagcagtcttcctaagaatttagttgcacaggtcaaaaagcttgcaaatatt
gttaaagctgaattttcttccaaattcacgtctgatacatctcatctcattgttggagtg
gatgaaaataatagggctgacaaaaccttgaaatacctttgtgctgttgctgctggaaaa
tgggttgtctcccctgcatgggtggagaaatgcttagaagccaagaaacttttaccagag
gaaccttttgaagctctagataccacaggtgagccaggccctcaactttcgcgagagtct
cgcctctccaagaagaatctgttcagtggctttgagttctgttgcattggtgaatttcca
aatatatcaagagctcaaatgcaggctttattaattgattgtggcgcctccatcgtaagc
aagccaagcagcttctcttttgaggaacgtgttataccagtagcactcgctcaatgggac
gaatccaaagaagcagaatataaaacctggccgggagactgccgcgctcctcttgttcat
tatgagtgggttttggactgcattggaaaattttctgtaacatctttctcagcgatgctg
ctaagtgatgtctctgaagactactatgtgtccatgggtattccatcgtttcctgtttga
DBGET
integrated database retrieval system
