Thermoanaerobacter pseudethanolicus: Teth39_1694
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Entry
Teth39_1694 CDS
T00649
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tpd
Thermoanaerobacter pseudethanolicus
Pathway
tpd03030
DNA replication
tpd03410
Base excision repair
tpd03420
Nucleotide excision repair
tpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Teth39_1694
03410 Base excision repair
Teth39_1694
03420 Nucleotide excision repair
Teth39_1694
03430 Mismatch repair
Teth39_1694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpd03032
]
Teth39_1694
03400 DNA repair and recombination proteins [BR:
tpd03400
]
Teth39_1694
Enzymes [BR:
tpd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Teth39_1694
DNA replication proteins [BR:
tpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Teth39_1694
DNA repair and recombination proteins [BR:
tpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Teth39_1694
NER (nucleotide excision repair)
GGR (global genome repair) factors
Teth39_1694
MMR (mismatch excision repair)
DNA ligase
Teth39_1694
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Teth39_1694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
RNA_ligase
PTCB-BRCT
BRCT_2
HHH_8
HHH_3
STB2_C
Cdd1
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ABY95331
UniProt:
B0KBN6
LinkDB
All DBs
Position
complement(1730085..1732073)
Genome browser
AA seq
662 aa
AA seq
DB search
MDPKERIKELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQR
VGGEPLKEFEPFTHVVPMLSLANAFSEGELRDFDRRVREAVGDVEYVVELKIDGLSVELI
YEKGIFTVGSTRGDGIVGENVTQNLKTIKSIPLRLKDDVSLVVRGEVFMPRASFEKLNEE
REKLGESLFANPRNAAAGSLRQLDPKVTAKRDLDIFIFNLQKIEGRKFKTHIETLEFLNE
QGFKIIPIHKKCSNIDEVIKEIEEIRNLRDKLPYDIDGAVVKVNDLEKREILGQTAKDPR
WAIAFKYPAERKKTKVLDIIVQVGRTGALTPTAILEPVAISGSVVSRATLHNEDYIKEKD
IRIGDTVIVQKAGEIIPEVVEVVKEERTGQEREFVMPDRCPECGALAVRLLGEAIRRCTG
LNCPAQLLRGIIHFASKDAMDIEGLGPAIINQLLSKGLIHNIADLYYLKYEDLIQLERMG
DKSVKNLLNAIEESKTRDLDRLLFGLGINLIGSKAAQVIAEHFKTMDNIMKAKFEDFTQL
PDIGPKMARSIVSFFAEKQNVEIIEKLKNAGVNMKKIPKEKVNNIFEGKTFVLTGALGNY
TREEATRIIEERGGKVTNSVSKKTDYVLVGKDPGSKLKKAQELGIKIIDEKQFEEMLKGE
NI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaagaaaggataaaggaattgagagaaaaaataaattatcacaattacaga
tattacgttttggaccaaccagagatttcagactatgagtacgacatgctgatgagagaa
cttatagaattagaagaaaaatatccagagcttaaaactccagactctccatcccaaaga
gtaggtggggagcctttaaaagaatttgagccttttacccatgtagttccaatgttaagt
ttggctaatgctttttctgagggagaacttagagactttgacagaagagtaagagaggca
gtgggagatgtagagtacgtagtagaattaaaaattgacggcttatctgtggaactaatt
tatgaaaaaggcatatttactgtgggttctacaagaggagacgggatcgtaggagaaaat
gtcacacaaaatttaaagactataaagtcaattcctttaaggcttaaggatgatgtaagc
cttgttgtaagaggagaggtcttcatgccccgcgcttcttttgaaaaattaaatgaggag
agagaaaaattaggggaaagcctttttgcaaatcccagaaatgctgcagcaggttcttta
aggcaattagatcctaaagtgacggcgaaaagagatttagacatttttatttttaacctt
cagaagattgagggtagaaaatttaaaacccacatagagacattagaatttttgaatgaa
cagggatttaaaataataccaattcataaaaaatgtagcaatatagatgaagtaataaaa
gaaatagaagagataagaaacttacgagataagctgccttacgacattgatggagcagtt
gtaaaagtaaatgaccttgaaaagagagaaattttaggccagactgccaaagaccccagg
tgggctattgcttttaaatatcctgcagagaggaaaaagacaaaagtcttggatataata
gttcaagtaggaaggactggagcccttactcctacagctatattagagcctgtagctatt
tcaggttcagttgtaagccgagctacacttcacaatgaggactacataaaagagaaagac
ataaggataggagacacggtaatagttcaaaaagcgggagaaatcattcctgaagtagta
gaagtggtaaaagaagagaggactggacaagaaagagaatttgtaatgccagatagatgc
cctgaatgcggtgctttagctgtcaggcttctgggtgaggctataaggcgttgcacaggt
ctaaattgtcctgcacagcttctaagaggcattatccactttgcttcaaaagatgcaatg
gatatagaaggattggggccagctataataaatcagcttttgtcaaaaggtctaattcac
aacatagcagatttgtattatcttaaatacgaagatttaatacaattagaaagaatgggg
gacaaatctgttaaaaatttattaaatgctattgaagaaagcaaaacaagagatttagat
agattgctctttggcttgggtataaacttaataggcagtaaagctgcccaagtgattgct
gagcattttaagacaatggacaatatcatgaaggcaaaatttgaagactttacacagttg
cctgacataggacctaagatggcaagaagcatagtttccttttttgcagaaaaacaaaat
gtagagataattgaaaaacttaaaaatgctggagtaaacatgaaaaaaattccaaaagaa
aaagtaaacaacatatttgaagggaaaacttttgttttgacaggagcgttgggaaattac
acgagagaagaagctaccaggataattgaagaaagaggtggaaaagttacaaattcagta
agtaaaaaaacagactatgtattagtaggtaaagatcctggctctaaacttaaaaaagcc
caagaattaggaataaagataattgatgaaaaacaatttgaagaaatgctaaaaggtgaa
aatatttaa
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