Tetrapisispora phaffii: TPHA_0D00450
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Entry
TPHA_0D00450 CDS
T02235
Symbol
TPHA0D00450
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0D00450 (TPHA0D00450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0D00450 (TPHA0D00450)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TPHA_0D00450 (TPHA0D00450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_15
AAA_23
AAA_18
AAA_22
Arf
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
11534424
NCBI-ProteinID:
XP_003685123
UniProt:
G8BS68
LinkDB
All DBs
Position
4:complement(76541..77377)
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AA seq
278 aa
AA seq
DB search
MSTSLAVKIDHLTYTFPQQAAPALHDVSLEIPWHTRTLLVGCNGAGKSTILRLLSGKHLC
LGGNILVNDHNPFSPLPLDGDAGDVVNCVYLGLEWAHMEIINRDVRVSELLDSIGFAHFE
QRGRELLQILEVDTHWRMHMLSDGQKRRVQLVMGLLKPWRVLLLDEVTVDLDVIGRSRLL
AFLEHETQRRRCSVLYATHIFDGLNSWPHRVLHLDRGRIVDSLALPADVQFTAARDAEVA
ENRDTAGHRDTKPTLTVPKSDSLHPLALHWLARDRDRT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctccctcgctgtgaaaattgaccatttgacgtacaccttcccccagcaggcg
gcccccgcgctgcacgacgtctccttggagatcccttggcacacccgcactctgctggtg
ggctgcaacggtgccgggaaatcgacgatcctgcgtctgctgagcggcaagcacctgtgc
ctgggcggcaacatcctcgtgaacgaccacaaccctttctccccgctgccgctcgacggc
gacgccggcgacgtcgtcaactgcgtctacctgggcctcgagtgggcccacatggagatc
atcaacagggacgtccgggtgagcgagctgctcgacagcatcggcttcgcgcatttcgag
cagcgcggccgcgagctgctgcagatcctggaagtcgacacgcactggcgcatgcacatg
ctgagcgacggccagaagcgccgcgtgcagctggtgatgggcctgctgaagccgtggcgc
gtgctgctgctggacgaggtgacggtcgacctggacgtcatcggccgcagccgcctcctg
gcgttcctggagcacgagacccagcgcagacgctgcagcgtgctgtacgccacgcacatc
ttcgacgggctgaacagctggccgcaccgggtgctgcacctggaccgcggccgcatcgtc
gactcgctggcgctgcccgccgacgtccagttcaccgccgcccgcgacgccgaagtcgcc
gagaaccgcgacaccgccggccaccgcgacacaaagccgacgctgaccgtccccaaaagt
gacagcctgcacccgctggcgctgcattggctcgcacgtgacagggaccgcacctag
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