KEGG   Tetrapisispora phaffii: TPHA_0D03410
Entry
TPHA_0D03410      CDS       T02235                                 
Symbol
TPHA0D03410
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TPHA_0D03410 (TPHA0D03410)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0D03410 (TPHA0D03410)
   03041 Spliceosome [BR:tpf03041]
    TPHA_0D03410 (TPHA0D03410)
   03032 DNA replication proteins [BR:tpf03032]
    TPHA_0D03410 (TPHA0D03410)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TPHA_0D03410 (TPHA0D03410)
Spliceosome [BR:tpf03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TPHA_0D03410 (TPHA0D03410)
  U2 snRNP components
    TPHA_0D03410 (TPHA0D03410)
 Complex B
  U1 snRNP components
    TPHA_0D03410 (TPHA0D03410)
  U4/U6.U5 tri-snRNP components
    TPHA_0D03410 (TPHA0D03410)
 Complex C
  U2 snRNP components
    TPHA_0D03410 (TPHA0D03410)
DNA replication proteins [BR:tpf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TPHA_0D03410 (TPHA0D03410)
SSDB
Motif
Pfam: LSM LSM14
Other DBs
NCBI-GeneID: 11534550
NCBI-ProteinID: XP_003685410
UniProt: G8BT05
LinkDB
Position
4:complement(718159..718698)
AA seq 179 aa
MSSTYGKVSVKQNSKLRNLINYRIRVVTKDGKLYLGELMAFDKHMNVVLGDCVEERISKQ
QLQKIIQNRGKQDTSKENNVIKTEKRVLGLVILRGEQILSTVVEDKPVLTKKDRIEETKK
QKKQLNNQKRARKGKTDDSKGKIVKPTSSNGEKSTYNANNTVIPGNLRKFQPPPGFKRK
NT seq 540 nt   +upstreamnt  +downstreamnt
atgagttcaacttatggtaaagtatctgttaagcaaaacagtaaattaagaaatttaatc
aattacagaatcagagtcgtcacaaaggatggtaaattatatttaggtgaactgatggca
tttgataagcatatgaacgttgtgttaggcgattgtgtggaggaaagaatatcaaaacag
caacttcaaaagataattcaaaaccgtggcaaacaagatacatcaaaagagaacaacgta
ataaaaactgagaagagagtactgggtttagtgatactaagaggggagcaaatattatct
acagttgttgaagataaacctgtattaactaaaaaagatagaattgaagaaactaagaag
cagaaaaaacaattaaataatcaaaagcgagctagaaagggtaaaaccgacgatagtaag
ggcaaaatagtaaaaccaacaagtagtaacggtgaaaagagtacatataacgcaaacaat
acggtaataccaggcaacttaagaaagttccaaccacccccaggcttcaaaagaaaataa

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