Tetrapisispora phaffii: TPHA_0D03410
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Entry
TPHA_0D03410 CDS
T02235
Symbol
TPHA0D03410
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0D03410 (TPHA0D03410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0D03410 (TPHA0D03410)
03041 Spliceosome [BR:
tpf03041
]
TPHA_0D03410 (TPHA0D03410)
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0D03410 (TPHA0D03410)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TPHA_0D03410 (TPHA0D03410)
Spliceosome [BR:
tpf03041
]
Complex A
U1 snRNP components
Sm proteins
TPHA_0D03410 (TPHA0D03410)
U2 snRNP components
TPHA_0D03410 (TPHA0D03410)
Complex B
U1 snRNP components
TPHA_0D03410 (TPHA0D03410)
U4/U6.U5 tri-snRNP components
TPHA_0D03410 (TPHA0D03410)
Complex C
U2 snRNP components
TPHA_0D03410 (TPHA0D03410)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TPHA_0D03410 (TPHA0D03410)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
11534550
NCBI-ProteinID:
XP_003685410
UniProt:
G8BT05
LinkDB
All DBs
Position
4:complement(718159..718698)
Genome browser
AA seq
179 aa
AA seq
DB search
MSSTYGKVSVKQNSKLRNLINYRIRVVTKDGKLYLGELMAFDKHMNVVLGDCVEERISKQ
QLQKIIQNRGKQDTSKENNVIKTEKRVLGLVILRGEQILSTVVEDKPVLTKKDRIEETKK
QKKQLNNQKRARKGKTDDSKGKIVKPTSSNGEKSTYNANNTVIPGNLRKFQPPPGFKRK
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacttatggtaaagtatctgttaagcaaaacagtaaattaagaaatttaatc
aattacagaatcagagtcgtcacaaaggatggtaaattatatttaggtgaactgatggca
tttgataagcatatgaacgttgtgttaggcgattgtgtggaggaaagaatatcaaaacag
caacttcaaaagataattcaaaaccgtggcaaacaagatacatcaaaagagaacaacgta
ataaaaactgagaagagagtactgggtttagtgatactaagaggggagcaaatattatct
acagttgttgaagataaacctgtattaactaaaaaagatagaattgaagaaactaagaag
cagaaaaaacaattaaataatcaaaagcgagctagaaagggtaaaaccgacgatagtaag
ggcaaaatagtaaaaccaacaagtagtaacggtgaaaagagtacatataacgcaaacaat
acggtaataccaggcaacttaagaaagttccaaccacccccaggcttcaaaagaaaataa
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