Treponema primitia: TREPR_1063
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Entry
TREPR_1063 CDS
T01507
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tpi
Treponema primitia
Pathway
tpi00300
Lysine biosynthesis
tpi00550
Peptidoglycan biosynthesis
tpi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TREPR_1063
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TREPR_1063
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpi01011
]
TREPR_1063
Enzymes [BR:
tpi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
TREPR_1063
Peptidoglycan biosynthesis and degradation proteins [BR:
tpi01011
]
Precursor biosynthesis
Amino acid ligase
TREPR_1063
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
AEF84744
UniProt:
F5YHD8
LinkDB
All DBs
Position
complement(3257419..3259002)
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AA seq
527 aa
AA seq
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MERCLSDFFTDGISWQAELLEKNGREDPLITGLEYDSRKVKPGNLFFALPGLHTDGHRFI
PDAIQRGAAAILYQDELTEFQDGVLYLRARNSRAAMSPVASSFYNNPSKQLTIIGVTGTE
GKSTTVYLIYQFLLLAGKKAGFVSTVQYSDGTGELWNPEHQTTPEAITIHRLLADMVANG
AEYAVIEASSHGLSPKTNRLGDVAFDVSVMTNVTHEHLEFHGTWEQYRDDKANLFRTLDH
YDHLKGVHLQKTEALPPSFGVANADDPSVGYFASATLHKTYTYSTRGKDADISLRSVESA
VNGNWYEALIRETGEVVDIRDRLPGAFNAGNVLASLLVVSGLLFVPVKDLIPLVTKLKPV
RGRMTKVQRGQPFEVLVDYAHTPSSFETIFPPLRERIDRTGGRIISLFGSAGERDTKKRP
EQGRIAADWSDLVFLTDEDPRGEVPLTILEEIALGCPEGKRGENLFLIPDRSQAIRKAFS
LAESGDLVLLLGKGHENSIIYATETIAYDEIAEAEKALGEMGFTGTN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttgtttatctgattttttcaccgatggtatttcctggcaagcggagttattg
gaaaaaaatggccgggaggatcctctgatcacggggcttgaatacgactcccgtaaggtt
aagccggggaacctcttttttgccctaccgggactgcataccgacgggcaccggtttatc
cccgatgccatacagaggggggcggcggcgattctgtatcaggatgagttgaccgaattc
caggatggagtcctgtatctgcgggcgcgaaattcccgggctgccatgtccccggtggcg
tcttccttctataataacccctccaaacagttaactattatcggggtaaccggcaccgag
gggaaaagcaccacggtttacctgatctaccagtttctgctcctggccggaaaaaaagcg
gggttcgtttctacagtacagtacagtgatggtaccggtgagctctggaacccggagcat
cagactaccccggaggctatcaccatacacaggctcctggctgatatggtcgcaaacggc
gccgaatatgcggtgattgaggccagttcccacggcctttccccaaagaccaaccgcctg
ggggatgtggcctttgatgtaagcgtcatgaccaacgtgacccatgagcacctggaattt
cacggcacctgggagcagtaccgggatgacaaggccaatcttttccgcaccctggaccac
tacgatcatcttaaaggcgtccatttacaaaaaaccgaggcgctccccccttctttcgga
gtagccaatgcggatgaccccagcgtcggctatttcgcctccgccaccctgcataaaacc
tatacctacagtacccggggcaaagacgcggacatttccctgcggagcgtagaaagcgcc
gttaatggcaactggtatgaggcgttgatccgggaaaccggggaagtagtggatatccgg
gaccgtttgcccggggcttttaatgccgggaatgtcctggcaagcctcctcgtcgtttca
gggctcctctttgtgccggtaaaagacttgatcccactggtaaccaagctcaaaccggtc
cgagggcgtatgacaaaggttcaaagaggacaaccctttgaagtgttggtggactatgcc
catactccctcttcttttgaaacgattttccctcccttacgggaacgaatagacagaacc
gggggtcgcatcatcagcctcttcggttccgccggggagcgggacaccaaaaagcggcct
gaacagggccggatcgccgccgactggtcggatttagtgttcctcaccgacgaggatccc
cggggcgaggtacccctgaccatcctggaggaaatcgccctaggctgtcctgagggtaaa
cgaggcgagaacctcttcctcattccggatcgaagccaggccatacggaaggccttttct
ctggctgagagcggggacctggtcctcctcctggggaagggtcacgagaattcgattata
tatgcgacagaaaccatagcctacgacgagatcgccgaggcagaaaaggccctgggggaa
atgggctttaccggaacaaactaa
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