Tenacibaculum platacis: T19A05C_2532
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Entry
T19A05C_2532 CDS
T11461
Name
(GenBank) RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tplt Tenacibaculum platacis
Pathway
tplt01501
beta-Lactam resistance
tplt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T19A05C_2532
01503 Cationic antimicrobial peptide (CAMP) resistance
T19A05C_2532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tplt03036
]
T19A05C_2532
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tplt02000
]
T19A05C_2532
01504 Antimicrobial resistance genes [BR:
tplt01504
]
T19A05C_2532
Chromosome and associated proteins [BR:
tplt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
T19A05C_2532
Transporters [BR:
tplt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
T19A05C_2532
Antimicrobial resistance genes [BR:
tplt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
T19A05C_2532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
DUF5025
Peptidase_M23
BSH_CzcB
Beta-barrel_YknX
Motif
Other DBs
NCBI-ProteinID:
CAL2089308
LinkDB
All DBs
Position
T190524A05C:2890385..2891422
Genome browser
AA seq
345 aa
AA seq
DB search
MFKKSFLLIILTIAACGKENKTSQEEEIQLKVVSKGTSVEVVKVSDSVFNKQLWVNGKIE
AVKKAELRFQASNQLSSVKVANGDYVKQHQIIGVLENSLLKNNMQKATIELQKAQNKLAA
EKINYGKQNITPSILKNLEIKSGVIEARNNLERAKIEYDQTFLKAPFSAIVANIEKREGD
YIGTADAFCTVINPNALEVSFAVLENEYQFIAKNQEVEVRGYNAKQKSFKGRITEVNPLV
DENGLIKVTATIIDKNTGLLDGMNVKILINHPLHNVVIIPKSALVLRSNREVVFTIENNL
AKWNYVEIAGENSDSYAVKKGLKGTDTVIISGNLNLAHNTKVIAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaatcctttctattaataattttaacaatagctgcttgtggaaaagagaat
aaaacttctcaggaagaagaaattcagttgaaagtggttagcaaaggaacttcggtcgaa
gttgtaaaagtttcagattcagttttcaataaacaactttgggttaatgggaaaattgag
gctgttaaaaaagcagaactacgttttcaagcatccaatcaattgtcttccgtaaaggtt
gctaatggagattatgtaaagcaacatcaaatcattggagttttagaaaatagtttacta
aaaaacaatatgcaaaaagccacaatcgaacttcaaaaagcacagaataaacttgcagca
gaaaaaattaattacggcaaacagaacattactccgagtattttaaaaaacttagaaatt
aaaagtggagttattgaggcgaggaataatttagaaagagctaaaattgagtatgatcaa
acttttttaaaagctccgttttcagcaatagtggcgaatattgaaaaaagagaaggagat
tatatcggaacggctgatgctttttgtacagtgattaatcctaatgcattagaagtttcg
tttgcagtactagaaaacgagtatcaatttatagctaaaaatcaagaggttgaagtccga
ggttacaacgctaaacaaaaatcgtttaaaggaaggattacggaagtaaacccgttagtt
gatgaaaacggattaataaaagttacagctacgattatagataaaaatacagggttatta
gatggaatgaacgtaaagattttaattaatcatcctttgcacaatgtggtgattataccc
aaatcagcattggtactaaggtcaaatagagaggtagtttttactatagaaaataactta
gccaaatggaattatgttgaaatagccggagaaaatagtgatagttatgctgttaaaaaa
ggcttaaaaggtaccgacactgttattatttctggtaaccttaacttagcacataataca
aaagttatagctgaataa
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