Treponema pallidum subsp. pallidum Mexico A: TPAMA_0775
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Entry
TPAMA_0775 CDS
T02273
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPAMA_0775 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpo03400
]
TPAMA_0775 (nth)
Enzymes [BR:
tpo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TPAMA_0775 (nth)
DNA repair and recombination proteins [BR:
tpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TPAMA_0775 (nth)
Prokaryotic type
TPAMA_0775 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
HHH_5
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
AFU66758
LinkDB
All DBs
Position
844869..845504
Genome browser
AA seq
211 aa
AA seq
DB search
MRLLDSKGVHAVFEQLHAANPQPQGELHWRNTFTLLVAVLLSAQATDKSVNKATAALFDV
ADTPQAMLALGEERLCSYIRTINLYPTKARRIIALSAELIERFAAQVPCDAHALESLPGV
GHKTANVVLNMGFGIPTIAVDTHILRTAPRIGLSSGRTPRAVERDLLVVTPREFRMHAHH
WILLHGRYTCTARRPRCTECCLRDLCCKNNI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctattagacagcaagggggtacacgccgtttttgagcagctgcacgcagcaaac
ccgcaaccacaaggagaacttcactggcgcaatacttttacgctcctggtggcagtactg
ctttctgcgcaggcaacagacaaaagcgtcaacaaggcgaccgctgctctgtttgatgtg
gcagacaccccccaagcaatgctcgcgctgggggaagaacggctatgctcctacatacgg
acgattaatttataccccacgaaagcacgccgaatcattgcactcagtgctgaactcatc
gagcgcttcgctgcccaagtaccgtgcgacgcccatgccctagagagtctacccggggtc
ggtcacaagacggcaaacgtagtcctgaacatgggttttggcatacccacaatcgcagtt
gatacgcatatcctgcggacagcgccacgcatcgggctttcctctggaagaaccccacgc
gcggttgaacgcgacttgcttgtggtcaccccgcgtgagtttcgcatgcatgcacatcac
tggattttactccacggacgctacacctgcaccgcacgaagaccacggtgcacggagtgc
tgcctaagagacctatgctgcaaaaacaacatataa
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