Thalassoglobus polymorphus: Mal48_02750
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Entry
Mal48_02750 CDS
T09805
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tpol
Thalassoglobus polymorphus
Pathway
tpol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mal48_02750 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpol03400
]
Mal48_02750 (pdg)
Enzymes [BR:
tpol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mal48_02750 (pdg)
DNA repair and recombination proteins [BR:
tpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mal48_02750 (pdg)
Prokaryotic type
Mal48_02750 (pdg)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF1308
Motif
Other DBs
NCBI-ProteinID:
QDT31045
UniProt:
A0A517QHF7
LinkDB
All DBs
Position
316645..317304
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AA seq
219 aa
AA seq
DB search
MFESIDAKKKQARKVVTRLRKHYPVAECALHHETPFQLLAATILSAQCTDERVNSVTPIL
FEKFPDAEALAAGTQAQVEKIVKSLGFFRAKATNLRGMAQRVVEVYDGELPRTLEELITL
PGVGRKTANVLLGTAYGIASGVVVDTHVRRISNLLGLTESQNPDIIERDLMAVLPKKEWI
TYSHRLIHHGRQICIARRPKCTECPLLKICPRVGLDPLE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatcaattgatgccaaaaagaaacaggcccgcaaggttgtgacccggttgcgg
aagcattatccggtcgctgagtgtgcattgcaccatgaaacgccgtttcagttgcttgca
gcaaccattctttcggctcagtgtactgacgaaagagtgaactctgtcactccgattctg
tttgagaaattccctgatgcagaagcgttagcggcaggaacgcaagctcaagtcgagaaa
atcgttaaatctttgggcttcttccgagcgaaggcaacgaacttgcgcggaatggcgcag
cgagtcgtggaggtctatgatggggaactcccacgaacactcgaagaattgatcacactt
cctggcgtcggacgaaaaacggccaacgtcttgctcggaaccgcatacgggatcgctagc
ggagttgtggtcgatacacatgttcggcgaatttccaacttgctcggtttgacagaaagc
cagaatccggacatcattgagagagacttgatggccgtgttgccgaagaaggagtggatc
acttactcacaccggttgattcaccacggacgacaaatctgtatcgcccgccgcccgaaa
tgcactgaatgccctctgttgaaaatctgtcctcgagtcggccttgacccactggaataa
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