KEGG   Trifolium pratense (red clover): 123887027
Entry
123887027         CDS       T08949                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123887027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123887027
Enzymes [BR:tpra01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     123887027
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     123887027
 Prokaryotic type
     123887027
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 123887027
NCBI-ProteinID: XP_045792258
LinkDB
Position
LG5:complement(52560845..52564135)
AA seq 285 aa
MEKKRKRNQKAERDGDRKPKSVPVAENLKQQPFPSHSGPTPQECLDIRDTLLSLHGLPPE
LAKYRKSQSTDDTVNSEPTETVLDGLVRTILSQNTTETNSQKAFVSLKSLFPTWEHVHDA
ETKDLENAIRCGGLAPTKTSCIKNLLRCLLERKGKLCLEYLRDLSVDQVKAELSVFKGIG
AKTVSCVLLFNLQLDDFPVDTHIFEIAKTIGWVPAAADRNKTYLHLNQRIPDELKFDLNC
LLYTHGKLCSKCSSKKGNKQQKKKEQQKKSNDDSCPLLNYYKELV
NT seq 858 nt   +upstreamnt  +downstreamnt
atggaaaagaagcggaaaaggaatcaaaaggcggagcgcgacggcgatcgaaaaccaaaa
tcggttccggtagccgagaatctaaagcagcaaccatttccttcacacagtggacccact
ccacaagaatgcctcgacatacgagacacactcttatccctccacggcttaccaccagaa
ctcgccaaataccgcaaatcgcaatccaccgacgacaccgtcaattcagaaccaacggaa
accgttctcgacggtttagtccgaaccatactctcacagaacactacagaaacaaattct
cagaaggctttcgtttctctcaaatcattatttcccacatgggaacatgtgcatgatgct
gagactaaggatttggagaatgctattcgatgtggtggtttagcaccgactaagacttcg
tgtattaagaatttgttgcgttgtttgttagagagaaaagggaaattgtgtttggagtat
ttaagagatttgtctgttgatcaagttaaagctgaactatctgttttcaaaggaattggt
gccaaaacagtctcttgcgtgttgctgttcaaccttcagctagatgattttcccgtggac
actcatatatttgagattgcgaaaaccattggttgggtacccgctgctgcagacagaaac
aagacataccttcatctaaaccaaaggatcccagatgaacttaagtttgacctaaattgc
cttctgtatactcacgggaaactctgcagtaaatgctccagtaaaaagggcaacaagcaa
cagaagaaaaaagagcaacagaagaaatccaatgacgactcttgtcctttattaaattat
tataaagagttggtttga

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