Trifolium pratense (red clover): 123891040
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Entry
123891040 CDS
T08949
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04075
Plant hormone signal transduction
tpra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123891040
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123891040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123891040
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123891040
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
123891040
NCBI-ProteinID:
XP_045796782
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Position
LG6:complement(3284482..3286671)
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AA seq
358 aa
AA seq
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MFDSSSSHIDFQSSQSKNSTHMFTYLTPLKKPRMEISSQKETTKLEKQCLVGCEYQKTGK
VNFSNFSIPAVFLKSTHQQNSSRNVASTKFQEQTAANKSRMELLPTVDEHSEAASHNSAF
DIRQKRKASAIDLCNERESSSVCSLEASNDLNYGLGKLHEETDDSPYFSDNEDEKSENMI
KEKVAREGNRIKKSYRNAKVHNLSERKRRDKINEKIRTLRELIPNCNKTDKASMLDDAIE
YLKNLKLQLQIMSMSRGLCMPFNHLMMLPTHHMNLNAQHLMGLRQPQVQFPIPQLSNGGV
TENNSRVQMFGFSNQFQVAPPMSIPNAPFMPHIIGNSSTTPSPTCYGDMQNQPGRTCG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattctagttcctctcatattgattttcaatcttcccaaagtaagaatagtact
cacatgttcacatatttaacaccattaaagaaaccaagaatggaaatttcaagccaaaaa
gaaacaacaaagttagagaaacaatgcttggtggggtgtgaatatcaaaaaacaggaaaa
gtgaatttctcaaacttttctatacctgcagtgtttctcaaatcaactcatcaacaaaat
agttcaagaaatgttgcttcaacaaaatttcaagaacaaactgctgctaacaaatcaaga
atggaattactaccaacagttgatgaacattctgaagctgctagccataacagtgccttt
gatattagacaaaagagaaaagctagtgctattgatctatgtaatgaaagagaatcttct
tctgtatgctcacttgaagcctcaaatgatctaaactacggtctcggaaaattacatgag
gaaaccgatgactcgccttatttcagtgataatgaagatgaaaaatcagaaaatatgata
aaagaaaaggtagctcgcgaaggaaacagaatcaagaaaagctacaggaatgctaaagtt
cataatttatcagaaaggaagagaagagataaaatcaacgaaaaaatacgtacattgaga
gagctcataccgaattgcaataagacggacaaagcttcaatgcttgacgatgccattgaa
tatcttaagaacctcaaacttcagttacagattatgtcaatgagtagaggactttgtatg
ccatttaatcatcttatgatgttaccaacacatcatatgaatttgaatgcacaacattta
atgggattgaggcaaccacaagtacagtttcctattccacaactgagtaatggtggtgtc
actgaaaataacagcagagttcagatgtttgggttctccaaccaatttcaagtagcacca
cctatgtcaattccaaatgcacctttcatgcctcatattattggaaactcttcaactaca
ccatcaccaacctgttatggtgacatgcagaatcaacctggcaggacatgtggttaa
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