KEGG   Trifolium pratense (red clover): 123891245
Entry
123891245         CDS       T08949                                 
Name
(RefSeq) protein SIEL-like
  KO
K13141  integrator complex subunit 4
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123891245
Spliceosome [BR:tpra03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    123891245
SSDB
Motif
Pfam: HEAT PDS5 HEAT_2 Cnd1 TPR_TTI1_C
Other DBs
NCBI-GeneID: 123891245
NCBI-ProteinID: XP_045797044
LinkDB
Position
LG6:complement(20166862..20175849)
AA seq 913 aa
MDDTPQLQSNSEQPLTLHTLSSIRSLLINPSTPKPTLSSILQTLTRSSQLTHHTLNLLTD
LAIHHPSFSQLALDSLLTATESPTRLAVDSLASISELSFPDSFELDDGRFVSLCFGPSIP
GRIWMLKNAGYLFKVRPALLFTVLLGFTKDPYPYVRAASLEGLVGLSERGDFNDVSMVKG
CYQRALQLLTDMEDCVRISAVRVVASWGLMLSASNADMKAYWCNEVFAKLCSMVRDMSMK
VRVEAFNGLAKMEIVSKDFLLQSLSKRVLRNEKQMEAMDQSTSEQFVTLATSVAGALVHG
LEEEFFEVRKSACQSLHTLTILSVEFAREALDLLMDMLNDDSVVVRLQALETMHHMAING
CLKLQEKHLHMFLGALVDNCREVRCAERKILKIVKLNDLAMFKSSIDRLMENLDSYLQDE
ADVFSAFSHLGRNHKKFVGYIVKETFEEVEAAFEGNDEFKSARIAALLIISISAPLFNEY
LGVIPPVLFSYAVTLLDRIYYAFSDIMDKDALLAYLCEKSRPPSYSAPNISHGEGEQQLP
LIEGDTPNCASNGVIDSEVGSQIMKEQKELPSYQVEQHQSEYSEVTKFVNFILAKCPDMW
QTIETGLTNEVLRSLRCLKEELSTMKFDSLGSHDALAFALLYIRIIILLVEVWEHLLPAK
GSRSHGMGELEFKLGKLDRRIKELMSTFVGFSAEEELNMLELILVTYALRLCKLETICVN
LTFKRLTSIYSCVESVLKERSVLPSNFVVELGKLLHECSLQFDRCLKLFSLKKFVFHGTV
KHLKAELSISNNDSLHPFPFVSGLPVSIPCKIKLHNIISNCKLWLRISLDDGLVQYVFLD
LDNFIGTGDVKIFDFVAPFYRTPKSNSLTLKVCISLECLFENVSPIQRYGGPKYELVPLC
KEKQVYYFNVNKD
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggacgatactccccaactccaatccaattccgaacaacctctcactcttcacacacta
tcttccataaggtcccttctcataaacccttcaactccaaaacccaccctttcctcaatc
ctccaaaccctaactcgttcctcacaactcactcaccacactctcaacctcctaaccgac
ctcgcaattcaccatccttccttttctcaactcgctctcgactcactcctcaccgccacc
gaatcccctactcgcctcgccgtcgattcactcgcgtcaatttcagaactgagtttccct
gactcgttcgaactcgatgatggacgctttgtttctctgtgttttggaccttccattccc
ggtcggatatggatgctgaagaatgcgggttatttgttcaaggtccgacccgcattgttg
tttacggtgttgttagggtttacgaaggatccttatccttatgtgagagctgcttcgttg
gaagggcttgttggtttgagcgaacgtggagatttcaatgatgttagtatggtgaaaggt
tgttatcaacgtgctcttcagcttcttactgatatggaagattgtgttagaatctctgct
gttcgtgttgtagcttcttggggtctgatgttatcagcttctaatgcagacatgaaggca
tattggtgcaatgaagtatttgctaagctttgttctatggtgagagacatgagcatgaag
gtcagagttgaagcctttaacggccttgcaaagatggaaatagtatctaaggattttctt
ttgcaaagcttatcaaagagagttttaagaaatgaaaagcaaatggaagctatggatcag
agcacctctgaacaatttgtgacgttggcaactagtgttgctggtgcactagttcatggg
cttgaggaggagttttttgaggtgcggaagtctgcatgccagtctttacacacactgaca
atcctctctgttgagtttgctcgtgaagccttagacttgttaatggatatgttgaatgat
gattctgtggtagttcggttacaagctttagaaaccatgcatcatatggcaattaatggc
tgtctaaagcttcaggaaaagcacttgcacatgtttctcggtgctctagtggacaactgt
agggaagtaagatgtgctgaaaggaaaatacttaaaatagtgaagctaaatgatctggct
atgttcaaatcatctattgacagacttatggaaaatttagacagttatctgcaggatgaa
gctgatgtattttctgcgttctctcatcttggtcgaaatcacaagaaatttgtaggctat
attgtcaaggaaacttttgaagaggtagaagcagcttttgaaggaaatgatgaatttaag
agtgcaaggatagctgcacttttaatcatttctatatctgccccgctatttaatgaatat
ttaggcgttataccaccagtgttgttttcttatgcagttacattgctagacagaatttat
tatgcttttagtgatatcatggataaggatgcccttttggcatacctctgtgagaaaagc
agacctccaagctattctgccccaaatattagccacggtgaaggggagcaacaattgcct
ttaattgaaggtgatactccaaattgtgctagcaatggggtcattgattcagaagttgga
tcacaaatcatgaaggaacaaaaagagctacccagctatcaggtagaacaacatcaatca
gagtatagtgaagttacaaagttcgtaaacttcattcttgcaaagtgccctgatatgtgg
caaacgatagagacaggtcttacaaatgaagtgttaaggtctttgaggtgtttgaaggag
gaattatcaactatgaaatttgactctttagggtctcatgatgctttggcatttgcatta
ctgtatatccggataataatattgcttgtagaagtgtgggagcacttgttgccagcaaaa
ggttcccgttctcatggaatgggagaattggaattcaaattgggaaagcttgataggagg
attaaagaattgatgagtacgtttgtaggtttttctgcggaagaagaattgaatatgttg
gagcttatattagtgacttatgccctcaggttatgtaaattggaaaccatttgtgtcaat
cttacattcaagagattgacttctatatattcatgcgttgaatctgtccttaaggaaaga
tcggttttgccatccaattttgtagttgaacttggtaagttattacatgaatgttcactt
cagtttgatagatgtctcaagctcttctccttgaagaagtttgtgtttcatggaacagtc
aaacatctaaaggcggaactaagcatttccaataatgactctctacatcctttccccttt
gtttcaggactaccggttagtataccatgtaaaatcaaactccataatattataagtaat
tgtaagttgtggttgaggatcagtttggatgatggcttagtacaatatgtctttcttgat
ttggacaattttataggcaccggagatgtaaaaatttttgattttgttgccccattttac
agaacaccaaaatctaattctcttacattgaaagtttgtattagcttagaatgtttgttt
gaaaatgttagtccaatccaaaggtatggaggaccaaaatatgaactagtacctctttgt
aaagaaaaacaagtatattatttcaatgttaataaagattaa

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