Trifolium pratense (red clover): 123891245
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Entry
123891245 CDS
T08949
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123891245
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
123891245
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PDS5
HEAT_2
Cnd1
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
123891245
NCBI-ProteinID:
XP_045797044
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All DBs
Position
LG6:complement(20166862..20175849)
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AA seq
913 aa
AA seq
DB search
MDDTPQLQSNSEQPLTLHTLSSIRSLLINPSTPKPTLSSILQTLTRSSQLTHHTLNLLTD
LAIHHPSFSQLALDSLLTATESPTRLAVDSLASISELSFPDSFELDDGRFVSLCFGPSIP
GRIWMLKNAGYLFKVRPALLFTVLLGFTKDPYPYVRAASLEGLVGLSERGDFNDVSMVKG
CYQRALQLLTDMEDCVRISAVRVVASWGLMLSASNADMKAYWCNEVFAKLCSMVRDMSMK
VRVEAFNGLAKMEIVSKDFLLQSLSKRVLRNEKQMEAMDQSTSEQFVTLATSVAGALVHG
LEEEFFEVRKSACQSLHTLTILSVEFAREALDLLMDMLNDDSVVVRLQALETMHHMAING
CLKLQEKHLHMFLGALVDNCREVRCAERKILKIVKLNDLAMFKSSIDRLMENLDSYLQDE
ADVFSAFSHLGRNHKKFVGYIVKETFEEVEAAFEGNDEFKSARIAALLIISISAPLFNEY
LGVIPPVLFSYAVTLLDRIYYAFSDIMDKDALLAYLCEKSRPPSYSAPNISHGEGEQQLP
LIEGDTPNCASNGVIDSEVGSQIMKEQKELPSYQVEQHQSEYSEVTKFVNFILAKCPDMW
QTIETGLTNEVLRSLRCLKEELSTMKFDSLGSHDALAFALLYIRIIILLVEVWEHLLPAK
GSRSHGMGELEFKLGKLDRRIKELMSTFVGFSAEEELNMLELILVTYALRLCKLETICVN
LTFKRLTSIYSCVESVLKERSVLPSNFVVELGKLLHECSLQFDRCLKLFSLKKFVFHGTV
KHLKAELSISNNDSLHPFPFVSGLPVSIPCKIKLHNIISNCKLWLRISLDDGLVQYVFLD
LDNFIGTGDVKIFDFVAPFYRTPKSNSLTLKVCISLECLFENVSPIQRYGGPKYELVPLC
KEKQVYYFNVNKD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggacgatactccccaactccaatccaattccgaacaacctctcactcttcacacacta
tcttccataaggtcccttctcataaacccttcaactccaaaacccaccctttcctcaatc
ctccaaaccctaactcgttcctcacaactcactcaccacactctcaacctcctaaccgac
ctcgcaattcaccatccttccttttctcaactcgctctcgactcactcctcaccgccacc
gaatcccctactcgcctcgccgtcgattcactcgcgtcaatttcagaactgagtttccct
gactcgttcgaactcgatgatggacgctttgtttctctgtgttttggaccttccattccc
ggtcggatatggatgctgaagaatgcgggttatttgttcaaggtccgacccgcattgttg
tttacggtgttgttagggtttacgaaggatccttatccttatgtgagagctgcttcgttg
gaagggcttgttggtttgagcgaacgtggagatttcaatgatgttagtatggtgaaaggt
tgttatcaacgtgctcttcagcttcttactgatatggaagattgtgttagaatctctgct
gttcgtgttgtagcttcttggggtctgatgttatcagcttctaatgcagacatgaaggca
tattggtgcaatgaagtatttgctaagctttgttctatggtgagagacatgagcatgaag
gtcagagttgaagcctttaacggccttgcaaagatggaaatagtatctaaggattttctt
ttgcaaagcttatcaaagagagttttaagaaatgaaaagcaaatggaagctatggatcag
agcacctctgaacaatttgtgacgttggcaactagtgttgctggtgcactagttcatggg
cttgaggaggagttttttgaggtgcggaagtctgcatgccagtctttacacacactgaca
atcctctctgttgagtttgctcgtgaagccttagacttgttaatggatatgttgaatgat
gattctgtggtagttcggttacaagctttagaaaccatgcatcatatggcaattaatggc
tgtctaaagcttcaggaaaagcacttgcacatgtttctcggtgctctagtggacaactgt
agggaagtaagatgtgctgaaaggaaaatacttaaaatagtgaagctaaatgatctggct
atgttcaaatcatctattgacagacttatggaaaatttagacagttatctgcaggatgaa
gctgatgtattttctgcgttctctcatcttggtcgaaatcacaagaaatttgtaggctat
attgtcaaggaaacttttgaagaggtagaagcagcttttgaaggaaatgatgaatttaag
agtgcaaggatagctgcacttttaatcatttctatatctgccccgctatttaatgaatat
ttaggcgttataccaccagtgttgttttcttatgcagttacattgctagacagaatttat
tatgcttttagtgatatcatggataaggatgcccttttggcatacctctgtgagaaaagc
agacctccaagctattctgccccaaatattagccacggtgaaggggagcaacaattgcct
ttaattgaaggtgatactccaaattgtgctagcaatggggtcattgattcagaagttgga
tcacaaatcatgaaggaacaaaaagagctacccagctatcaggtagaacaacatcaatca
gagtatagtgaagttacaaagttcgtaaacttcattcttgcaaagtgccctgatatgtgg
caaacgatagagacaggtcttacaaatgaagtgttaaggtctttgaggtgtttgaaggag
gaattatcaactatgaaatttgactctttagggtctcatgatgctttggcatttgcatta
ctgtatatccggataataatattgcttgtagaagtgtgggagcacttgttgccagcaaaa
ggttcccgttctcatggaatgggagaattggaattcaaattgggaaagcttgataggagg
attaaagaattgatgagtacgtttgtaggtttttctgcggaagaagaattgaatatgttg
gagcttatattagtgacttatgccctcaggttatgtaaattggaaaccatttgtgtcaat
cttacattcaagagattgacttctatatattcatgcgttgaatctgtccttaaggaaaga
tcggttttgccatccaattttgtagttgaacttggtaagttattacatgaatgttcactt
cagtttgatagatgtctcaagctcttctccttgaagaagtttgtgtttcatggaacagtc
aaacatctaaaggcggaactaagcatttccaataatgactctctacatcctttccccttt
gtttcaggactaccggttagtataccatgtaaaatcaaactccataatattataagtaat
tgtaagttgtggttgaggatcagtttggatgatggcttagtacaatatgtctttcttgat
ttggacaattttataggcaccggagatgtaaaaatttttgattttgttgccccattttac
agaacaccaaaatctaattctcttacattgaaagtttgtattagcttagaatgtttgttt
gaaaatgttagtccaatccaaaggtatggaggaccaaaatatgaactagtacctctttgt
aaagaaaaacaagtatattatttcaatgttaataaagattaa
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