Trifolium pratense (red clover): 123892730
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Entry
123892730 CDS
T08949
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123892730
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
123892730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PDS5
HEAT_2
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
123892730
NCBI-ProteinID:
XP_045798541
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All DBs
Position
LG6:complement(24035465..24041733)
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AA seq
913 aa
AA seq
DB search
MDDTPQLQSNSEQPLTLHTLSSIRSLLINPSTPKPTLSSILQTLTRSSQLTHHTLNLLTD
LAIHHPSFSQLALDSLLTATESPTRLAVDSLASISELSFPDSFELDDGRFVSLCFGPSIP
GRIWMLKNAGYLFKVRPALLFTVLLGFTKDPYPYVRAASLEGLVGLSERGDFNDVSMVKG
CYQRALQLLTDMEDCVRISAVRVVASWGLMLSASNADMKAYWCNEVFAKLCSMVRDMSMK
VRVEAFNGLAKMEIVSKDFLLQSLSKRVLRNEKQMEAMDQSTSEQFVTLATSVAGALVHG
LEEEFFEVRKSACQSLHTLTVLSVEFAREALDLLMDMLNDDSVVVRLQALETMHHMAING
CLKLQEKHLHMFLGALVDNCREVRCAERKILKIVKLNDLAMFKSSIDRLMENLDSYLQDE
ADVFSAFSHLGRNHKKFVGYIVKETFEEVEAAFEGNDEFKSARIAALLIISISAPLFNEY
LGVIPPVLFSYAVTLLDRIYYAFSDIMDKDALLAYLCEKSRPPSYSAPNISHGEGEQQLP
LIEGDTPNCASNGIIDSEVGSQIMKEQKELPSYQVEQHQSEYSEVTKFVNFILAKCPDMW
QTIETGLTNEVLRSLRCLKEELSTMKFDSLGSHDALAFALLYIRIIILLVEVWEHLLPAK
GSRSHGMGELEFKLGKLDRRIKELMSTFVGFSAEEELNMLELILVTYALRLCKLETICVN
LTFKRLTSIYSCVESILKERSVLPSNFVVELGKLLHECSLQFDRCLKLFSLKKFVFHGTV
KHLKAELSISNNDSLHPFPFVSGLPVSIPCKIKLHNIISNCKLWLRMSLDDGLVQYVFLD
LDNFIGTGDVKNFDFVAPFYRTPKSNSFTLKVCISLECLFENVSPIQRYGGPKYELVPLC
KEKQVYYFNVNKD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggacgatactccccaactccaatccaattccgaacaacctctcactcttcacacacta
tcttccataaggtcccttctcataaacccttcaactccaaaacccaccctttcctcaatc
ctccaaaccctaactcgttcctcacaactcactcaccacactctcaacctcctaaccgac
ctcgcaattcaccatccttccttttctcaactcgctctcgactcactcctcaccgccacc
gaatcccctactcgcctcgccgtcgattcactcgcgtcaatttcagaactgagtttccct
gactcgttcgaactcgatgatggacgctttgtttctctgtgttttggaccttccattccc
ggtcggatatggatgctgaagaatgcgggttatttgttcaaggtccgacccgcattgttg
tttacggtgttgttagggtttacgaaggatccttatccttatgtgagagctgcttcgttg
gaagggcttgttggtttgagcgaacgtggagatttcaatgatgttagtatggtgaaaggt
tgttatcaacgtgctcttcagcttcttactgatatggaagattgtgttagaatctctgct
gttcgtgttgtagcttcttggggtctgatgttatcagcttctaatgcagacatgaaggca
tattggtgcaatgaagtatttgctaagctttgttctatggtgagagacatgagcatgaag
gtcagagttgaagcctttaacggccttgcaaagatggaaatagtatctaaggattttctt
ttgcaaagcttatcaaagagagttttaagaaatgaaaagcaaatggaagctatggatcag
agcacctctgaacaatttgtgacgttggcaactagtgttgctggtgcactagttcatggg
cttgaggaggagttttttgaggtgcggaagtctgcatgccagtctttacacacactgaca
gtcctctctgttgagtttgctcgtgaagccttagacttgttaatggatatgttgaatgat
gattctgtggtggttcggttacaagctttagaaaccatgcatcatatggcaattaatggc
tgtctaaagcttcaggaaaagcacttgcacatgtttctcggtgctctagtggacaactgt
agggaagtaagatgtgctgaaaggaaaatacttaaaatagtgaagctaaatgatctggct
atgttcaaatcatctattgacagacttatggaaaatttagacagttatctgcaggatgaa
gctgatgtattttctgcgttctctcatcttggtcgaaatcacaagaaatttgtaggctat
atcgtcaaggaaacttttgaagaggtagaagcagcttttgaaggaaatgatgaatttaag
agtgcaaggatagctgcacttttaatcatttctatatctgccccgctatttaatgaatat
ttaggcgttataccaccagtgttgttttcttatgcagttacattgctagacagaatttat
tatgcttttagtgatatcatggataaggatgcccttttggcatacctctgtgagaaaagc
agacctccaagctattctgccccaaatattagccacggtgaaggggaacaacaattgcct
ttaattgaaggtgatactccaaattgtgctagcaatgggatcattgattcagaagttgga
tcacaaatcatgaaggaacaaaaagagctacccagctatcaggtagaacaacatcaatca
gagtatagtgaagttacaaagttcgtaaacttcattcttgcaaagtgccctgatatgtgg
caaacgatagagacaggtcttacaaatgaagtgttaaggtcgttgaggtgtttgaaggag
gaattatcaactatgaaatttgactctttagggtctcatgatgctttggcatttgcatta
ctgtatatccggataataatattgcttgtagaagtgtgggagcacttgttgccagcaaaa
ggttcccgttctcatggaatgggagaattggaattcaaattgggaaagcttgataggagg
attaaagaattgatgagtacgtttgtaggtttttctgcggaagaagaattgaatatgttg
gagcttatattagtgacttatgccctcaggttatgtaaattggaaaccatttgtgtcaat
cttacattcaagagattgacttctatatattcatgcgttgaatctatccttaaagaaaga
tcggttttgccatccaattttgtagttgaacttggtaagttattacatgagtgttcactt
cagtttgatagatgtctcaagctcttctccttgaagaagtttgtgtttcatggaacagtg
aaacatctaaaggcggaactaagcatttccaataatgactctctacatcctttccccttt
gtttcaggactaccggttagtataccatgtaaaatcaaactccataatattataagtaat
tgtaagttgtggttgaggatgagtttggatgatggcttagtacaatatgtctttcttgat
ttggacaattttataggcaccggagatgtaaaaaattttgattttgttgccccattttac
agaacaccaaaatctaattcttttacattgaaagtttgtattagcttagaatgtttgttt
gaaaatgttagtccaatccaaaggtatggaggaccaaaatatgaactagtacctctttgt
aaagaaaaacaagtatattatttcaatgttaataaagattaa
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