KEGG   Trifolium pratense (red clover): 123892730
Entry
123892730         CDS       T08949                                 
Name
(RefSeq) protein SIEL-like
  KO
K13141  integrator complex subunit 4
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123892730
Spliceosome [BR:tpra03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    123892730
SSDB
Motif
Pfam: HEAT PDS5 HEAT_2 TPR_TTI1_C
Other DBs
NCBI-GeneID: 123892730
NCBI-ProteinID: XP_045798541
LinkDB
Position
LG6:complement(24035465..24041733)
AA seq 913 aa
MDDTPQLQSNSEQPLTLHTLSSIRSLLINPSTPKPTLSSILQTLTRSSQLTHHTLNLLTD
LAIHHPSFSQLALDSLLTATESPTRLAVDSLASISELSFPDSFELDDGRFVSLCFGPSIP
GRIWMLKNAGYLFKVRPALLFTVLLGFTKDPYPYVRAASLEGLVGLSERGDFNDVSMVKG
CYQRALQLLTDMEDCVRISAVRVVASWGLMLSASNADMKAYWCNEVFAKLCSMVRDMSMK
VRVEAFNGLAKMEIVSKDFLLQSLSKRVLRNEKQMEAMDQSTSEQFVTLATSVAGALVHG
LEEEFFEVRKSACQSLHTLTVLSVEFAREALDLLMDMLNDDSVVVRLQALETMHHMAING
CLKLQEKHLHMFLGALVDNCREVRCAERKILKIVKLNDLAMFKSSIDRLMENLDSYLQDE
ADVFSAFSHLGRNHKKFVGYIVKETFEEVEAAFEGNDEFKSARIAALLIISISAPLFNEY
LGVIPPVLFSYAVTLLDRIYYAFSDIMDKDALLAYLCEKSRPPSYSAPNISHGEGEQQLP
LIEGDTPNCASNGIIDSEVGSQIMKEQKELPSYQVEQHQSEYSEVTKFVNFILAKCPDMW
QTIETGLTNEVLRSLRCLKEELSTMKFDSLGSHDALAFALLYIRIIILLVEVWEHLLPAK
GSRSHGMGELEFKLGKLDRRIKELMSTFVGFSAEEELNMLELILVTYALRLCKLETICVN
LTFKRLTSIYSCVESILKERSVLPSNFVVELGKLLHECSLQFDRCLKLFSLKKFVFHGTV
KHLKAELSISNNDSLHPFPFVSGLPVSIPCKIKLHNIISNCKLWLRMSLDDGLVQYVFLD
LDNFIGTGDVKNFDFVAPFYRTPKSNSFTLKVCISLECLFENVSPIQRYGGPKYELVPLC
KEKQVYYFNVNKD
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggacgatactccccaactccaatccaattccgaacaacctctcactcttcacacacta
tcttccataaggtcccttctcataaacccttcaactccaaaacccaccctttcctcaatc
ctccaaaccctaactcgttcctcacaactcactcaccacactctcaacctcctaaccgac
ctcgcaattcaccatccttccttttctcaactcgctctcgactcactcctcaccgccacc
gaatcccctactcgcctcgccgtcgattcactcgcgtcaatttcagaactgagtttccct
gactcgttcgaactcgatgatggacgctttgtttctctgtgttttggaccttccattccc
ggtcggatatggatgctgaagaatgcgggttatttgttcaaggtccgacccgcattgttg
tttacggtgttgttagggtttacgaaggatccttatccttatgtgagagctgcttcgttg
gaagggcttgttggtttgagcgaacgtggagatttcaatgatgttagtatggtgaaaggt
tgttatcaacgtgctcttcagcttcttactgatatggaagattgtgttagaatctctgct
gttcgtgttgtagcttcttggggtctgatgttatcagcttctaatgcagacatgaaggca
tattggtgcaatgaagtatttgctaagctttgttctatggtgagagacatgagcatgaag
gtcagagttgaagcctttaacggccttgcaaagatggaaatagtatctaaggattttctt
ttgcaaagcttatcaaagagagttttaagaaatgaaaagcaaatggaagctatggatcag
agcacctctgaacaatttgtgacgttggcaactagtgttgctggtgcactagttcatggg
cttgaggaggagttttttgaggtgcggaagtctgcatgccagtctttacacacactgaca
gtcctctctgttgagtttgctcgtgaagccttagacttgttaatggatatgttgaatgat
gattctgtggtggttcggttacaagctttagaaaccatgcatcatatggcaattaatggc
tgtctaaagcttcaggaaaagcacttgcacatgtttctcggtgctctagtggacaactgt
agggaagtaagatgtgctgaaaggaaaatacttaaaatagtgaagctaaatgatctggct
atgttcaaatcatctattgacagacttatggaaaatttagacagttatctgcaggatgaa
gctgatgtattttctgcgttctctcatcttggtcgaaatcacaagaaatttgtaggctat
atcgtcaaggaaacttttgaagaggtagaagcagcttttgaaggaaatgatgaatttaag
agtgcaaggatagctgcacttttaatcatttctatatctgccccgctatttaatgaatat
ttaggcgttataccaccagtgttgttttcttatgcagttacattgctagacagaatttat
tatgcttttagtgatatcatggataaggatgcccttttggcatacctctgtgagaaaagc
agacctccaagctattctgccccaaatattagccacggtgaaggggaacaacaattgcct
ttaattgaaggtgatactccaaattgtgctagcaatgggatcattgattcagaagttgga
tcacaaatcatgaaggaacaaaaagagctacccagctatcaggtagaacaacatcaatca
gagtatagtgaagttacaaagttcgtaaacttcattcttgcaaagtgccctgatatgtgg
caaacgatagagacaggtcttacaaatgaagtgttaaggtcgttgaggtgtttgaaggag
gaattatcaactatgaaatttgactctttagggtctcatgatgctttggcatttgcatta
ctgtatatccggataataatattgcttgtagaagtgtgggagcacttgttgccagcaaaa
ggttcccgttctcatggaatgggagaattggaattcaaattgggaaagcttgataggagg
attaaagaattgatgagtacgtttgtaggtttttctgcggaagaagaattgaatatgttg
gagcttatattagtgacttatgccctcaggttatgtaaattggaaaccatttgtgtcaat
cttacattcaagagattgacttctatatattcatgcgttgaatctatccttaaagaaaga
tcggttttgccatccaattttgtagttgaacttggtaagttattacatgagtgttcactt
cagtttgatagatgtctcaagctcttctccttgaagaagtttgtgtttcatggaacagtg
aaacatctaaaggcggaactaagcatttccaataatgactctctacatcctttccccttt
gtttcaggactaccggttagtataccatgtaaaatcaaactccataatattataagtaat
tgtaagttgtggttgaggatgagtttggatgatggcttagtacaatatgtctttcttgat
ttggacaattttataggcaccggagatgtaaaaaattttgattttgttgccccattttac
agaacaccaaaatctaattcttttacattgaaagtttgtattagcttagaatgtttgttt
gaaaatgttagtccaatccaaaggtatggaggaccaaaatatgaactagtacctctttgt
aaagaaaaacaagtatattatttcaatgttaataaagattaa

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